Package: pandaR 1.37.0

Joseph N. Paulson

pandaR: PANDA Algorithm

Runs PANDA, an algorithm for discovering novel network structure by combining information from multiple complementary data sources.

Authors:Dan Schlauch, Joseph N. Paulson, Albert Young, John Quackenbush, Kimberly Glass

pandaR_1.37.0.tar.gz
pandaR_1.37.0.zip(r-4.5)pandaR_1.37.0.zip(r-4.4)pandaR_1.37.0.zip(r-4.3)
pandaR_1.37.0.tgz(r-4.4-any)pandaR_1.37.0.tgz(r-4.3-any)
pandaR_1.37.0.tar.gz(r-4.5-noble)pandaR_1.37.0.tar.gz(r-4.4-noble)
pandaR_1.37.0.tgz(r-4.4-emscripten)pandaR_1.37.0.tgz(r-4.3-emscripten)
pandaR.pdf |pandaR.html✨
pandaR/json (API)

# Install 'pandaR' in R:
install.packages('pandaR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • pandaResult - Analysis result from PANDA algorithm on toy data
  • pandaResultPairs - Analysis result from PANDA algorithm on toy data converted into pairs
  • pandaToyData - Toy gene expression, motif, and ppi data

On BioConductor:pandaR-1.37.0(bioc 3.20)pandaR-1.36.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

14 exports 1.51 score 38 dependencies 1 dependents 1 mentions

Last updated 2 months agofrom:9d69a496e7

Exports:calcDegreecalcDegreeDifferenceimportPandaMatlabmultiplotpandaplotCommunityDetectionplotGraphplotZplotZbyTFsubnetworksummary.pandatargetedGenestestMotiftopedges

Dependencies:BiobaseBiocGenericsclicolorspacecpp11fansifarverggplot2gluegtablehexbinigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmatrixStatsmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppreshaperlangRUnitscalestibbleutf8vctrsviridisLitewithr

An Introduction to the pandaR Package

Daniel Schlauch, Albert Young, Joseph N. Paulson

Rendered frompandaR.Rmdusingknitr::rmarkdownon Jul 02 2024.

Last update: 2016-05-01
Started: 2015-04-06