Package: miRNApath 1.65.0

James M. Ward

miRNApath: miRNApath: Pathway Enrichment for miRNA Expression Data

This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.

Authors:James M. Ward <[email protected]> with contributions from Yunling Shi, Cindy Richards, John P. Cogswell

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miRNApath.pdf |miRNApath.html✨
miRNApath/json (API)
NEWS

# Install 'miRNApath' in R:
install.packages('miRNApath', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • mirnaobj - Mirnaobj, an S4 object of class "mirnapath"

On BioConductor:miRNApath-1.65.0(bioc 3.20)miRNApath-1.64.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

7 exports 2.83 score 0 dependencies 13 mentions

Last updated 2 months agofrom:33c05f02e1

Exports:filtermirnapathloadmirnapathloadmirnapathwaysloadmirnatogenemirnaTablerunEnrichmentshow

Dependencies:

miRNApath: Pathway Enrichment for miRNA Expression Data

Rendered frommiRNApath.Rnwusingutils::Sweaveon Jul 03 2024.

Last update: 2013-11-01
Started: 2013-11-01