Package: miRNATarget 1.51.0

Y-h. Taguchi

miRNATarget: gene target tabale of miRNA for human/mouse used for MiRaGE package

gene target tabale of miRNA for human/mouse used for MiRaGE package

Authors:Y-h. Taguchi <[email protected]>

miRNATarget_1.51.0.tar.gz
miRNATarget_1.51.0.tar.gz(r-4.7-any)miRNATarget_1.51.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
miRNATarget/json (API)

# Install 'miRNATarget' in R:

install.packages('miRNATarget', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

conv_id - MiRNA conservation table of mouse/human, based upon TargetScanMouse/Human 6.1
conv_id - MiRNA conservation table of mouse/human, based upon TargetScanMouse/Human 6.1
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
id_conv - Conversion table between refseq and various gene id/probe id
TBL2 - Target gene table miRNA
TBL2 - Target gene table miRNA

On BioConductor:miRNATarget-1.51.0(data/experiment 3.24)miRNATarget-1.50.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

experimentdata homo_sapiens_data datapkg

3.30 score 3 scripts 0 exports 3 dependencies

Last updated from:d6b67016d1. Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: yes.

This is a data package. Data packages may be large and do not get checked across all platforms.

Target	Result	Time
bioc-checks	ERROR	112
linux-devel	NOTE	234
source / vignettes	OK	423
linux-release	NOTE	264

Exports:

Dependencies:Biobase BiocGenerics generics

miRNATargetTutorial

Overview

Rendered frommiRNATarget.Rnwusingutils::Sweave

Last update: 2013-12-08
Started: 2013-11-01

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
miRNA conservation table of mouse/human, based upon TargetScanMouse/Human 6.1	conv_id
miRNA conservation table of human	HS_conv_id
Conversion table between RefSeq and affy_hc_g110 for human	HS_refseq_to_affy_hc_g110
Conversion table between RefSeq and affy_hg_focus for human	HS_refseq_to_affy_hg_focus
Conversion table between RefSeq and affy_hg_u133_plus_2 for human	HS_refseq_to_affy_hg_u133_plus_2
Conversion table between RefSeq and affy_hg_u133a for human	HS_refseq_to_affy_hg_u133a
Conversion table between RefSeq and affy_hg_u133a_2 for human	HS_refseq_to_affy_hg_u133a_2
Conversion table between RefSeq and affy_hg_u133b for human	HS_refseq_to_affy_hg_u133b
Conversion table between RefSeq and affy_hg_u95a for human	HS_refseq_to_affy_hg_u95a
Conversion table between RefSeq and affy_hg_u95av2 for human	HS_refseq_to_affy_hg_u95av2
Conversion table between RefSeq and affy_hg_u95b for human	HS_refseq_to_affy_hg_u95b
Conversion table between RefSeq and affy_hg_u95c for human	HS_refseq_to_affy_hg_u95c
Conversion table between RefSeq and affy_hg_u95d for human	HS_refseq_to_affy_hg_u95d
Conversion table between RefSeq and affy_hg_u95e for human	HS_refseq_to_affy_hg_u95e
Conversion table between RefSeq and affy_huex_1_0_st_v2 for human	HS_refseq_to_affy_huex_1_0_st_v2
Conversion table between RefSeq and affy_hugene_1_0_st_v1 for human	HS_refseq_to_affy_hugene_1_0_st_v1
Conversion table between RefSeq and affy_hugenefl for human	HS_refseq_to_affy_hugenefl
Conversion table between RefSeq and affy_u133_x3p for human	HS_refseq_to_affy_u133_x3p
Conversion table between RefSeq and agilent_cgh_44b for human	HS_refseq_to_agilent_cgh_44b
Conversion table between RefSeq and agilent_wholegenome for human	HS_refseq_to_agilent_wholegenome
Conversion table between RefSeq and canonical_transcript_stable_id for human	HS_refseq_to_canonical_transcript_stable_id
Conversion table between RefSeq and ccds for human	HS_refseq_to_ccds
Conversion table between RefSeq and codelink for human	HS_refseq_to_codelink
Conversion table between RefSeq and embl for human	HS_refseq_to_embl
Conversion table between RefSeq and ensembl_gene_id for human	HS_refseq_to_ensembl_gene_id
Conversion table between RefSeq and ensembl_peptide_id for human	HS_refseq_to_ensembl_peptide_id
Conversion table between RefSeq and ensembl_transcript_id for human	HS_refseq_to_ensembl_transcript_id
Conversion table between RefSeq and entrezgene for human	HS_refseq_to_entrezgene
Conversion table between RefSeq and hgnc_id for human	HS_refseq_to_hgnc_id
Conversion table between RefSeq and hgnc_symbol for human	HS_refseq_to_hgnc_symbol
Conversion table between RefSeq and hgnc_transcript_name for human	HS_refseq_to_hgnc_transcript_name
Conversion table between RefSeq and HS_refseq_to_efg_agilent_sureprint_g3_ge_8x60k for human	HS_refseq_to_HS_refseq_to_efg_agilent_sureprint_g3_ge_8x60k
Conversion table between RefSeq and HS_refseq_to_efg_agilent_wholegenome_4x44k_v1 for human	HS_refseq_to_HS_refseq_to_efg_agilent_wholegenome_4x44k_v1
Conversion table between RefSeq and HS_refseq_to_efg_agilent_wholegenome_4x44k_v2 for human	HS_refseq_to_HS_refseq_to_efg_agilent_wholegenome_4x44k_v2
Conversion table between RefSeq and HS_refseq_to_ensembl_exon_id for human	HS_refseq_to_HS_refseq_to_ensembl_exon_id
Conversion table between RefSeq and HS_refseq_to_uniprot_genename_transcript_name for human	HS_refseq_to_HS_refseq_to_uniprot_genename_transcript_name
Conversion table between RefSeq and HS_refseq_to_uniprot_sptrembl for human	HS_refseq_to_HS_refseq_to_uniprot_sptrembl
Conversion table between RefSeq and HS_refseq_to_uniprot_swissprot for human	HS_refseq_to_HS_refseq_to_uniprot_swissprot
Conversion table between RefSeq and HS_refseq_to_uniprot_swissprot_accession for human	HS_refseq_to_HS_refseq_to_uniprot_swissprot_accession
Conversion table between RefSeq and HS_refseq_to_wikigene_id for human	HS_refseq_to_HS_refseq_to_wikigene_id
Conversion table between RefSeq and illumina_humanht_12 for human	HS_refseq_to_illumina_humanht_12
Conversion table between RefSeq and illumina_humanwg_6_v1 for human	HS_refseq_to_illumina_humanwg_6_v1
Conversion table between RefSeq and illumina_humanwg_6_v2 for human	HS_refseq_to_illumina_humanwg_6_v2
Conversion table between RefSeq and illumina_humanwg_6_v3 for human	HS_refseq_to_illumina_humanwg_6_v3
Conversion table between RefSeq and interpro for human	HS_refseq_to_interpro
Conversion table between RefSeq and ipi for human	HS_refseq_to_ipi
Conversion table between RefSeq and merops for human	HS_refseq_to_merops
Conversion table between RefSeq and pdb for human	HS_refseq_to_pdb
Conversion table between RefSeq and pfam for human	HS_refseq_to_pfam
Conversion table between RefSeq and phalanx_onearray for human	HS_refseq_to_phalanx_onearray
Conversion table between RefSeq and protein_id for human	HS_refseq_to_protein_id
Conversion table between RefSeq and refseq_dna for human	HS_refseq_to_refseq_dna
Conversion table between RefSeq and refseq_genomic for human	HS_refseq_to_refseq_genomic
Conversion table between RefSeq and refseq_peptide for human	HS_refseq_to_refseq_peptide
Conversion table between RefSeq and rfam for human	HS_refseq_to_rfam
Conversion table between RefSeq and rfam_gene_name for human	HS_refseq_to_rfam_gene_name
Conversion table between RefSeq and rfam_transcript_name for human	HS_refseq_to_rfam_transcript_name
Conversion table between RefSeq and smart for human	HS_refseq_to_smart
Conversion table between RefSeq and tigrfam for human	HS_refseq_to_tigrfam
Conversion table between RefSeq and ucsc for human	HS_refseq_to_ucsc
Conversion table between RefSeq and unigene for human	HS_refseq_to_unigene
Conversion table between RefSeq and uniprot_genename for human	HS_refseq_to_uniprot_genename
Conversion table between RefSeq and wikigene_name for human	HS_refseq_to_wikigene_name
Conversion table between refseq and various gene id/probe id	id_conv
miRNA conservation table of mouse	MM_conv_id
Conversion table between RefSeq and affy_mg_u74a for mouse	MM_refseq_to_affy_mg_u74a
Conversion table between RefSeq and affy_mg_u74av2 for mouse	MM_refseq_to_affy_mg_u74av2
Conversion table between RefSeq and affy_mg_u74b for mouse	MM_refseq_to_affy_mg_u74b
Conversion table between RefSeq and affy_mg_u74bv2 for mouse	MM_refseq_to_affy_mg_u74bv2
Conversion table between RefSeq and affy_mg_u74c for mouse	MM_refseq_to_affy_mg_u74c
Conversion table between RefSeq and affy_mg_u74cv2 for mouse	MM_refseq_to_affy_mg_u74cv2
Conversion table between RefSeq and affy_moe430a for mouse	MM_refseq_to_affy_moe430a
Conversion table between RefSeq and affy_moe430b for mouse	MM_refseq_to_affy_moe430b
Conversion table between RefSeq and affy_moex_1_0_st_v1 for mouse	MM_refseq_to_affy_moex_1_0_st_v1
Conversion table between RefSeq and affy_mogene_1_0_st_v1 for mouse	MM_refseq_to_affy_mogene_1_0_st_v1
Conversion table between RefSeq and affy_mouse430_2 for mouse	MM_refseq_to_affy_mouse430_2
Conversion table between RefSeq and affy_mouse430a_2 for mouse	MM_refseq_to_affy_mouse430a_2
Conversion table between RefSeq and affy_mu11ksuba for mouse	MM_refseq_to_affy_mu11ksuba
Conversion table between RefSeq and affy_mu11ksubb for mouse	MM_refseq_to_affy_mu11ksubb
Conversion table between RefSeq and agilent_wholegenome for mouse	MM_refseq_to_agilent_wholegenome
Conversion table between RefSeq and canonical_transcript_stable_id for mouse	MM_refseq_to_canonical_transcript_stable_id
Conversion table between RefSeq and ccds for mouse	MM_refseq_to_ccds
Conversion table between RefSeq and codelink for mouse	MM_refseq_to_codelink
Conversion table between RefSeq and embl for mouse	MM_refseq_to_embl
Conversion table between RefSeq and ensembl_gene_id for mouse	MM_refseq_to_ensembl_gene_id
Conversion table between RefSeq and ensembl_peptide_id for mouse	MM_refseq_to_ensembl_peptide_id
Conversion table between RefSeq and ensembl_transcript_id for mouse	MM_refseq_to_ensembl_transcript_id
Conversion table between RefSeq and entrezgene for mouse	MM_refseq_to_entrezgene
Conversion table between RefSeq and fantom for mouse	MM_refseq_to_fantom
Conversion table between RefSeq and illumina_mousewg_6_v1 for mouse	MM_refseq_to_illumina_mousewg_6_v1
Conversion table between RefSeq and illumina_mousewg_6_v2 for mouse	MM_refseq_to_illumina_mousewg_6_v2
Conversion table between RefSeq and interpro for mouse	MM_refseq_to_interpro
Conversion table between RefSeq and ipi for mouse	MM_refseq_to_ipi
Conversion table between RefSeq and merops for mouse	MM_refseq_to_merops
Conversion table between RefSeq and mgi_id for mouse	MM_refseq_to_mgi_id
Conversion table between RefSeq and mgi_symbol for mouse	MM_refseq_to_mgi_symbol
Conversion table between RefSeq and mgi_transcript_name for mouse	MM_refseq_to_mgi_transcript_name
Conversion table between RefSeq and MM_refseq_to_efg_agilent_sureprint_g3_ge_8x60k for mouse	MM_refseq_to_MM_refseq_to_efg_agilent_sureprint_g3_ge_8x60k
Conversion table between RefSeq and MM_refseq_to_efg_agilent_wholegenome_4x44k_v1 for mouse	MM_refseq_to_MM_refseq_to_efg_agilent_wholegenome_4x44k_v1
Conversion table between RefSeq and MM_refseq_to_efg_agilent_wholegenome_4x44k_v2 for mouse	MM_refseq_to_MM_refseq_to_efg_agilent_wholegenome_4x44k_v2
Conversion table between RefSeq and MM_refseq_to_ensembl_exon_id for mouse	MM_refseq_to_MM_refseq_to_ensembl_exon_id
Conversion table between RefSeq and MM_refseq_to_uniprot_genename_transcript_name for mouse	MM_refseq_to_MM_refseq_to_uniprot_genename_transcript_name
Conversion table between RefSeq and MM_refseq_to_uniprot_sptrembl for mouse	MM_refseq_to_MM_refseq_to_uniprot_sptrembl
Conversion table between RefSeq and MM_refseq_to_uniprot_swissprot for mouse	MM_refseq_to_MM_refseq_to_uniprot_swissprot
Conversion table between RefSeq and MM_refseq_to_uniprot_swissprot_accession for mouse	MM_refseq_to_MM_refseq_to_uniprot_swissprot_accession
Conversion table between RefSeq and MM_refseq_to_wikigene_id for mouse	MM_refseq_to_MM_refseq_to_wikigene_id
Conversion table between RefSeq and pdb for mouse	MM_refseq_to_pdb
Conversion table between RefSeq and pfam for mouse	MM_refseq_to_pfam
Conversion table between RefSeq and phalanx_onearray for mouse	MM_refseq_to_phalanx_onearray
Conversion table between RefSeq and protein_id for mouse	MM_refseq_to_protein_id
Conversion table between RefSeq and refseq_dna for mouse	MM_refseq_to_refseq_dna
Conversion table between RefSeq and refseq_peptide for mouse	MM_refseq_to_refseq_peptide
Conversion table between RefSeq and rfam for mouse	MM_refseq_to_rfam
Conversion table between RefSeq and rfam_gene_name for mouse	MM_refseq_to_rfam_gene_name
Conversion table between RefSeq and rfam_transcript_name for mouse	MM_refseq_to_rfam_transcript_name
Conversion table between RefSeq and smart for mouse	MM_refseq_to_smart
Conversion table between RefSeq and tigrfam for mouse	MM_refseq_to_tigrfam
Conversion table between RefSeq and ucsc for mouse	MM_refseq_to_ucsc
Conversion table between RefSeq and unigene for mouse	MM_refseq_to_unigene
Conversion table between RefSeq and uniprot_genename for mouse	MM_refseq_to_uniprot_genename
Conversion table between RefSeq and wikigene_name for mouse	MM_refseq_to_wikigene_name
Target gene table miRNA	TBL2
Target gene table miRNA of human	TBL2_HS
Target gene table miRNA of mouse	TBL2_MM