Package: miRBaseConverter 1.31.0

Taosheng Xu Taosheng Xu

miRBaseConverter: A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions

A comprehensive tool for converting and retrieving the miRNA Name, Accession, Sequence, Version, History and Family information in different miRBase versions. It can process a huge number of miRNAs in a short time without other depends.

Authors:Taosheng Xu Taosheng Xu [aut, cre]

miRBaseConverter_1.31.0.tar.gz
miRBaseConverter_1.31.0.zip(r-4.5)miRBaseConverter_1.31.0.zip(r-4.4)miRBaseConverter_1.31.0.zip(r-4.3)
miRBaseConverter_1.31.0.tgz(r-4.5-any)miRBaseConverter_1.31.0.tgz(r-4.4-any)miRBaseConverter_1.31.0.tgz(r-4.3-any)
miRBaseConverter_1.31.0.tar.gz(r-4.5-noble)miRBaseConverter_1.31.0.tar.gz(r-4.4-noble)
miRBaseConverter_1.31.0.tgz(r-4.4-emscripten)miRBaseConverter_1.31.0.tgz(r-4.3-emscripten)
miRBaseConverter.pdf |miRBaseConverter.html✨
miRBaseConverter/json (API)
NEWS

# Install 'miRBaseConverter' in R:
install.packages('miRBaseConverter', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/taoshengxu/mirbaseconverter/issues

Datasets:

On BioConductor:miRBaseConverter-1.31.0(bioc 3.21)miRBaseConverter-1.30.0(bioc 3.20)

softwaremirna

6.50 score 1 stars 70 scripts 210 downloads 10 mentions 16 exports 0 dependencies

Last updated 4 months agofrom:163132a6c7. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 31 2025
R-4.5-winOKJan 31 2025
R-4.5-macOKJan 31 2025
R-4.5-linuxOKJan 31 2025
R-4.4-winOKJan 31 2025
R-4.4-macOKJan 31 2025
R-4.3-winOKJan 31 2025
R-4.3-macOKJan 31 2025

Exports:checkMiRNAAlivecheckMiRNAFamilycheckMiRNAVersiongetAllMiRNAsgetAllSpeciesgetAllVersionInfogetMiRNAHistorygetMiRNASequencegetMiRNATablegoTo_miRBasegoTo_miRNAFamilymiRNA_AccessionToNamemiRNA_MatureToPrecursormiRNA_NameToAccessionmiRNA_PrecursorToMaturemiRNAVersionConvert

Dependencies:

miRBaseConverter: A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions

Taosheng Xu

Rendered frommiRBaseConverter-vignette.Rmdusingknitr::rmarkdownon Jan 31 2025.

Last update: 2024-08-24
Started: 2017-06-06