Package: methylMnM 1.51.0

Yan Zhou

methylMnM: detect different methylation level (DMR)

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Authors:Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang

methylMnM_1.51.0.tar.gz
methylMnM_1.51.0.zip(r-4.7)methylMnM_1.51.0.zip(r-4.6)methylMnM_1.51.0.zip(r-4.5)
methylMnM_1.51.0.tgz(r-4.6-x86_64)methylMnM_1.51.0.tgz(r-4.6-arm64)methylMnM_1.51.0.tgz(r-4.5-x86_64)methylMnM_1.51.0.tgz(r-4.5-arm64)
methylMnM_1.51.0.tar.gz(r-4.7-arm64)methylMnM_1.51.0.tar.gz(r-4.7-x86_64)methylMnM_1.51.0.tar.gz(r-4.6-arm64)methylMnM_1.51.0.tar.gz(r-4.6-x86_64)
methylMnM_1.51.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
methylMnM/json (API)

# Install 'methylMnM' in R:
install.packages('methylMnM', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:methylMnM-1.51.0(bioc 3.24)methylMnM-1.50.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwarednamethylationsequencing

4.38 score 1 packages 2 scripts 482 downloads 4 mentions 18 exports 5 dependencies

Last updated from:192c6c89b5. Checks:1 ERROR, 11 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR141
linux-devel-arm64NOTE182
linux-devel-x86_64NOTE199
source / vignettesOK222
linux-release-arm64NOTE126
linux-release-x86_64NOTE172
macos-release-arm64NOTE97
macos-release-x86_64NOTE394
macos-oldrel-arm64NOTE112
macos-oldrel-x86_64NOTE199
windows-develNOTE110
windows-releaseNOTE94
windows-oldrelNOTE82
wasm-releaseOK132

Exports:calcFactornewcalculatecountcalculatecount1calculatecountnegCNVnormalcountcpgbincountMeDIPbincountMREbincountMREcpgbincpgcountMnM.qvalueMnM.selectDMRMnM.testnormpdfnormpdft1pmultinomqvalue.rankremoveblacklist

Dependencies:edgeRlatticelimmalocfitstatmod

methylMnM

Rendered frommethylMnM.Rnwusingutils::Sweaveon May 30 2026.

Last update: 2018-08-30
Started: 2013-11-01