Package: metahdep 1.71.0
John R. Stevens
metahdep: Hierarchical Dependence in Meta-Analysis
Tools for meta-analysis in the presence of hierarchical (and/or sampling) dependence, including with gene expression studies
Authors:
metahdep_1.71.0.tar.gz
metahdep_1.71.0.tar.gz(r-4.7-arm64)metahdep_1.71.0.tar.gz(r-4.7-x86_64)metahdep_1.71.0.tar.gz(r-4.6-arm64)metahdep_1.71.0.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
metahdep/json (API)
| # Install 'metahdep' in R: |
| install.packages('metahdep', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- gloss.Table1 - Gloss: Data from the JEBS glossing paper
- gloss.theta - Gloss: Data from the JEBS glossing paper
- gloss.V - Gloss: Data from the JEBS glossing paper
- gloss.X - Gloss: Data from the JEBS glossing paper
- HGU.DifExp.list - HGU.DifExp.list: A list of 4 ES.obj objects
- HGU.newnames - HGU.newnames
- HGU.prep.list - HGU.prep.list
On BioConductor:metahdep-1.71.0(bioc 3.24)metahdep-1.70.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
microarraydifferentialexpression
Last updated from:9eda8c5a8c. Checks:1 ERROR, 4 WARNING, 1 OK, 8 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 132 | ||
| linux-devel-arm64 | WARNING | 124 | ||
| linux-devel-x86_64 | WARNING | 182 | ||
| source / vignettes | OK | 151 | ||
| linux-release-arm64 | WARNING | 112 | ||
| linux-release-x86_64 | WARNING | 163 | ||
| macos-release-arm64 | FAIL | 108 | ||
| macos-release-x86_64 | FAIL | 138 | ||
| macos-oldrel-arm64 | FAIL | 66 | ||
| macos-oldrel-x86_64 | FAIL | 158 | ||
| windows-devel | FAIL | 78 | ||
| windows-release | FAIL | 66 | ||
| windows-oldrel | FAIL | 62 | ||
| wasm-release | FAIL | 82 |
Exports:center.columnsget.Mget.varsigma.vgetPLM.esidLinMod.HBLM.fast.depLinMod.MetAn.dep.FEMALinMod.MetAn.dep.REMALinMod.REMA.delta.splitLinMod.REMA.depmetahdepmetahdep.check.Xmetahdep.FEMAmetahdep.formatmetahdep.HBLMmetahdep.list2dataframemetahdep.REMAmodnew.LinMod.HBLM.fast.dep.delta.splittr
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Class ES.obj | ES.obj-class |
| getPLM.es | getPLM.es |
| gloss: Data from the JEBS glossing paper | gloss gloss.Table1 gloss.theta gloss.V gloss.X |
| HGU.DifExp.list: A list of 4 ES.obj objects | HGU.DifExp.list |
| HGU.newnames | HGU.newnames |
| HGU.prep.list | HGU.prep.list |
| metahdep | metahdep |
| metahdep.FEMA | metahdep.FEMA |
| metahdep.format | metahdep.format |
| metahdep.HBLM | metahdep.HBLM |
| metahdep.other | center.columns get.M get.varsigma.v id LinMod.HBLM.fast.dep LinMod.MetAn.dep.FEMA LinMod.MetAn.dep.REMA LinMod.REMA.delta.split LinMod.REMA.dep metahdep.check.X metahdep.list2dataframe mod new.LinMod.HBLM.fast.dep.delta.split tr |
| metahdep.REMA | metahdep.REMA |
| Class metaprep | metaprep-class |
