Package: maPredictDSC 1.51.0

Adi Laurentiu Tarca

maPredictDSC: Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge

This package implements the classification pipeline of the best overall team (Team221) in the IMPROVER Diagnostic Signature Challenge. Additional functionality is added to compare 27 combinations of data preprocessing, feature selection and classifier types.

Authors:Adi Laurentiu Tarca <[email protected]>

maPredictDSC_1.51.0.tar.gz
maPredictDSC_1.51.0.zip(r-4.7)maPredictDSC_1.51.0.zip(r-4.6)maPredictDSC_1.51.0.zip(r-4.5)
maPredictDSC_1.51.0.tgz(r-4.6-any)maPredictDSC_1.51.0.tgz(r-4.5-any)
maPredictDSC_1.51.0.tar.gz(r-4.7-any)maPredictDSC_1.51.0.tar.gz(r-4.6-any)
maPredictDSC_1.51.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
maPredictDSC/json (API)

# Install 'maPredictDSC' in R:
install.packages('maPredictDSC', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:maPredictDSC-1.51.0(bioc 3.24)maPredictDSC-1.50.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayclassification

3.30 score 2 scripts 343 downloads 1 mentions 3 exports 120 dependencies

Last updated from:c471e01dff. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR214
linux-devel-x86_64NOTE379
source / vignettesOK323
linux-release-x86_64NOTE398
macos-release-arm64NOTE239
macos-oldrel-arm64NOTE220
windows-develNOTE347
windows-releaseNOTE338
windows-oldrelNOTE344
wasm-releaseOK178

Exports:aggregateDSCperfDSCpredictDSC

Dependencies:affyaffyioAnnotationDbiaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64bitopsblobcachemcaretcaToolsclasscliclockcodetoolscpp11crayoncurldata.tableDBIdiagramdigestdplyre1071evaluatefarverfastmapforeachfuturefuture.applygcrmagenericsggplot2globalsgluegowergplotsgtablegtoolshardhathgu133plus2.dbhighrhttripredIRangesisobanditeratorsjsonliteKEGGRESTKernSmoothknitrlabelinglatticelavalifecyclelimmalistenvlubridateLungCancerACvsSCCGEOmagrittrMASSMatrixmemoisemimeModelMetricsnlmennetnumDerivopensslorg.Hs.eg.dbparallellypillarpkgconfigplyrpngpreprocessCorepROCprodlimprogressrproxypurrrR6RColorBrewerRcpprecipesreshape2rlangROCROCRrpartRSQLiteS4VectorsS7scalesSeqinfoshapesparsevctrsSQUAREMstatmodstringistringrsurvivalsystibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithrxfunXVectoryaml

maPredictDSC

Rendered frommaPredictDSC.Rnwusingutils::Sweaveon May 30 2026.

Last update: 2013-11-01
Started: 2013-11-01