Introduction | Import of HapMap LD data | A view of the block structure | Collecting SNPs exhibiting linkage to selected SNP
Package: ldblock 1.43.0
VJ Carey
ldblock: data structures for linkage disequilibrium measures in populations
Define data structures for linkage disequilibrium measures in populations.
Authors:
ldblock_1.43.0.tar.gz
ldblock_1.43.0.zip(r-4.7)ldblock_1.43.0.zip(r-4.6)ldblock_1.43.0.zip(r-4.5)
ldblock_1.43.0.tgz(r-4.6-any)ldblock_1.43.0.tgz(r-4.5-any)
ldblock_1.43.0.tar.gz(r-4.7-any)ldblock_1.43.0.tar.gz(r-4.6-any)
ldblock_1.43.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ldblock/json (API)
| # Install 'ldblock' in R: |
| install.packages('ldblock', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- EUR_singletons - Singletons from EUR
- sampinf_1kg - Population and relationship information for 1000 genomes
On BioConductor:ldblock-1.43.0(bioc 3.24)ldblock-1.42.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:02f040f4c1. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 268 | ||
| linux-devel-x86_64 | NOTE | 292 | ||
| source / vignettes | OK | 278 | ||
| linux-release-x86_64 | NOTE | 305 | ||
| macos-release-arm64 | NOTE | 205 | ||
| macos-oldrel-arm64 | NOTE | 145 | ||
| windows-devel | NOTE | 225 | ||
| windows-release | NOTE | 218 | ||
| windows-oldrel | NOTE | 195 | ||
| wasm-release | OK | 189 |
Exports:downloadPopByChrexpandSnpSethmldldByGeneldmats3_1kgstack1kg
Dependencies:askpassBiocGenericscurlgenericshttrIRangesjsonlitelatticeMatrixmimeopensslR6rlangS4VectorsSeqinfosys
