Package: interactiveDisplay 1.43.0

Bioconductor Package Maintainer

interactiveDisplay: Package for enabling powerful shiny web displays of Bioconductor objects

The interactiveDisplay package contains the methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Authors:Bioconductor Package Maintainer [cre], Shawn Balcome [aut], Marc Carlson [ctb]

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interactiveDisplay.pdf |interactiveDisplay.html✨
interactiveDisplay/json (API)

# Install 'interactiveDisplay' in R:

install.packages('interactiveDisplay', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

expr - An Example ExpressionSet object
mmgr - An Example GRanges Object
mmgrl - An Example GRangesList Object
se - An Example RangedSummarizedExperiment Object

On BioConductor:interactiveDisplay-1.43.0(bioc 3.20)interactiveDisplay-1.42.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

6 exports 1.45 score 104 dependencies 1 mentions

Last updated 2 months agofrom:21b31e021f

Exports:altgr bicgo display gridsvgjs gridtweak simplenet

Dependencies:annotate AnnotationDbi askpass base64enc BH Biobase BiocGenerics Biostrings bit bit64 blob bslib cachem Category cli colorspace commonmark cpp11 crayon crosstalk curl DBI digest DT evaluate fansi farver fastmap fontawesome fs genefilter GenomeInfoDb GenomeInfoDbData ggplot2 glue graph gridSVG GSEABase gtable highr htmltools htmlwidgets httpuv httr interactiveDisplayBase IRanges isoband jquerylib jsonlite KEGGREST knitr labeling later lattice lazyeval lifecycle magrittr MASS Matrix MatrixGenerics matrixStats memoise mgcv mime munsell nlme openssl pillar pkgconfig plogr plyr png promises R6 rappdirs RBGL RColorBrewer Rcpp reshape2 rlang rmarkdown RSQLite S4Vectors sass scales shiny sourcetools stringi stringr survival sys tibble tinytex UCSC.utils utf8 vctrs viridisLite withr xfun XML xtable XVector yaml zlibbioc

interactiveDisplay: A package for enabling interactive visualization of Bioconductor objects

Rendered frominteractiveDisplay.Rnwusingknitr::knitron Jul 01 2024.

Last update: 2020-11-13
Started: 2014-09-03

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
altgr: Open a Shiny Application for ...	altgr altgr,ANY-method
bicgo: Open a Shiny Application for manual/interactive biclustering and GO exploration	bicgo bicgo,ANY-method
display: Open a Shiny application for a Bioconductor object	display display,ANY-method display,ExpressionSet-method display,GRanges-method display,GRangesList-method display,missing-method display,MRexperiment-method display,RangedSummarizedExperiment-method
An Example ExpressionSet object	expr
gridsvgjs: Open a Shiny Application for a Grid Plot	gridsvgjs gridsvgjs,ANY-method
gridtweak: Open a Shiny Application for the purpose of tweaking grid plots	gridtweak gridtweak,ANY-method
An Example GRanges Object	mmgr
An Example GRangesList Object	mmgrl
An Example RangedSummarizedExperiment Object	se
simplenet: Open a Shiny Application for ...	simplenet simplenet,ANY-method

Usage by other packages (reverse dependencies)