Package: iSEEindex 1.11.0

Kevin Rue-Albrecht

iSEEindex: iSEE extension for a landing page to a custom collection of data sets

This package provides an interface to any collection of data sets within a single iSEE web-application. The main functionality of this package is to define a custom landing page allowing app maintainers to list a custom collection of data sets that users can selected from and directly load objects into an iSEE web-application.

Authors:Kevin Rue-Albrecht [aut, cre], Thomas Sandmann [ctb], Federico Marini [aut], Denali Therapeutics [fnd]

iSEEindex_1.11.0.tar.gz
iSEEindex_1.11.0.zip(r-4.7)iSEEindex_1.11.0.zip(r-4.6)iSEEindex_1.11.0.zip(r-4.5)
iSEEindex_1.11.0.tgz(r-4.6-any)iSEEindex_1.11.0.tgz(r-4.5-any)
iSEEindex_1.11.0.tar.gz(r-4.7-any)iSEEindex_1.11.0.tar.gz(r-4.6-any)
iSEEindex_1.11.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
iSEEindex/json (API)

# Install 'iSEEindex' in R:
install.packages('iSEEindex', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/isee/iseeindex/issues

On BioConductor:iSEEindex-1.11.0(bioc 3.24)iSEEindex-1.10.0(bioc 3.23)

softwareinfrastructurebioconductorhacktoberfest

5.37 score 2 stars 13 scripts 8 exports 127 dependencies

Last updated from:ce60d556ea. Checks:8 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE285
linux-devel-x86_64NOTE526
source / vignettesOK374
linux-release-x86_64NOTE463
macos-release-arm64NOTE239
macos-oldrel-arm64NOTE250
windows-develNOTE1233
windows-releaseNOTE1380
windows-oldrelNOTE1452
wasm-releaseOK258

Exports:iSEEindexiSEEindexHttpsResourceiSEEindexLocalhostResourceiSEEindexRcallResourceiSEEindexRunrResourceiSEEindexS3Resourceprecacheshow

Dependencies:abindaskpassbase64encBiobaseBiocFileCacheBiocGenericsbitbit64blobbslibcachemcirclizecliclueclustercodetoolscolorspacecolourpickercommonmarkComplexHeatmapcpp11crayoncrosstalkcurlDBIdbplyrDelayedArraydigestdoParalleldplyrDTevaluatefarverfastmapfilelockfontawesomeforeachfsgenericsGenomicRangesGetoptLongggplot2ggrepelGlobalOptionsgluegtablehighrhtmltoolshtmlwidgetshttpuvhttr2igraphIRangesiSEEisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclelistviewermagrittrMatrixMatrixGenericsmatrixStatsmemoisemgcvmimeminiUInlmeopensslotelpaws.commonpaws.storagepillarpkgconfigpngpromisespurrrR6rappdirsRColorBrewerRcpprintrojsrjsonrlangrmarkdownRSQLiteS4ArraysS4VectorsS7sassscalesSeqinfoshapeshinyshinyAceshinydashboardshinyjsshinyWidgetsSingleCellExperimentsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytextriebeardurltoolsutf8vctrsviporviridisLitewithrxfunxml2xtableXVectoryaml

Implementing custom iSEEindex resources
iSEEindex resources | Overview | Implementation | Built-in resources | iSEEindexHttpsResource | Structure | Caching | iSEEindexLocalhostResource | iSEEindexRcallResource | iSEEindexS3Resource | iSEEindexRunrResource | Reproducibility | Bibliography
Rendered fromresources.Rmdusingknitr::rmarkdown

Last update: 2024-10-04
Started: 2022-11-25

Adding a custom header and footer to the landing page
Custom header and footer | Overview | Implementation | Example | Reproducibility | Bibliography
Rendered fromheader.Rmdusingknitr::rmarkdown

Last update: 2023-07-06
Started: 2023-07-06

Introduction to iSEEindex
Basics | Install iSEEindex | Required knowledge | Asking for help | Citing iSEEindex | Quick start to using iSEEindex | Reproducibility | Bibliography
Rendered fromiSEEindex.Rmdusingknitr::rmarkdown

Last update: 2023-06-14
Started: 2022-10-21

Readme and manuals

Help Manual

Help pageTopics
iSEEindex AppiSEEindex
The iSEEindexHttpsResource classiSEEindexHttpsResource iSEEindexHttpsResource-class precache,iSEEindexHttpsResource-method
The iSEEindexLocalhostResource classiSEEindexLocalhostResource iSEEindexLocalhostResource-class precache,iSEEindexLocalhostResource-method
The iSEEindexRcallResource classiSEEindexRcallResource iSEEindexRcallResource-class precache,iSEEindexRcallResource-method
The iSEEindexResource classiSEEindexResource-class precache,iSEEindexResource-method show,iSEEindexResource-method
Generics for iSEEindexResources ObjectsiSEEindexResource-generics precache
The iSEEindexRunrResource classiSEEindexRunrResource iSEEindexRunrResource-class precache,iSEEindexRunrResource-method
The iSEEindexS3Resource classiSEEindexS3Resource iSEEindexS3Resource-class precache,iSEEindexS3Resource-method