Introduction | The HPA project | HPA data usage policy | Installation | The r Biocpkg("hpar") package | Data sets | HPA interface | HPA release information | A small use case | Session information
Package: hpar 1.55.0
Laurent Gatto
hpar: Human Protein Atlas in R
The hpar package provides a simple R interface to and data from the Human Protein Atlas project.
Authors:
hpar_1.55.0.tar.gz
hpar_1.55.0.zip(r-4.7)hpar_1.55.0.zip(r-4.6)hpar_1.55.0.zip(r-4.5)
hpar_1.55.0.tgz(r-4.6-any)hpar_1.55.0.tgz(r-4.5-any)
hpar_1.55.0.tar.gz(r-4.7-any)hpar_1.55.0.tar.gz(r-4.6-any)
hpar_1.55.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hpar/json (API)
| # Install 'hpar' in R: |
| install.packages('hpar', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:hpar-1.55.0(bioc 3.24)hpar-1.54.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
proteomicscellbiologydataimportfunctionalgenomicssystemsbiologyexperimenthubsoftware
Last updated from:f4126f93ea. Checks:1 ERROR, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 197 | ||
| linux-devel-x86_64 | OK | 286 | ||
| source / vignettes | OK | 311 | ||
| linux-release-x86_64 | OK | 295 | ||
| macos-release-arm64 | OK | 132 | ||
| macos-oldrel-arm64 | OK | 168 | ||
| windows-devel | OK | 166 | ||
| windows-release | OK | 186 | ||
| windows-oldrel | OK | 173 | ||
| wasm-release | OK | 182 |
Exports:allHparDatabrowseHPAgetHpaDategetHpaEnsemblgetHpaVersionhpaCancerhpaCancer16.1hpaNormalTissuehpaNormalTissue16.1hpaSecretomehpaSubcellularLochpaSubcellularLoc14hpaSubcellularLoc16.1rnaConsensusTissuernaFantomTissuernaGeneCellLinernaGeneCellLine16.1rnaGeneTissue21.0rnaGtexTissuernaHpaTissue
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Browser the HPA page for a gene. | browseHPA |
| Obtain HPA data release information | allHparData getHpaDate getHpaEnsembl getHpaVersion |
