Package: gpaExample 1.25.0
Dongjun Chung
gpaExample: Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)
Example data for the GPA package, consisting of the p-values of 1,219,805 SNPs for five psychiatric disorder GWAS from the psychiatric GWAS consortium (PGC), with the annotation data using genes preferentially expressed in the central nervous system (CNS).
Authors:
gpaExample_1.25.0.tar.gz
gpaExample_1.25.0.tar.gz(r-4.7-any)gpaExample_1.25.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
gpaExample/json (API)
| # Install 'gpaExample' in R: |
| install.packages('gpaExample', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dongjunchung/gpa/issues
- exampleData - PGC GWAS Dataset and Annotation Dataset
On BioConductor:gpaExample-1.25.0(data/experiment 3.24)gpaExample-1.24.0(data/experiment 3.23)
experimentdatahomo_sapiens_datasnpdatadatapkg
Last updated from:58fc0b5157. Checks:1 ERROR, 3 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 141 | ||
| linux-devel | OK | 135 | ||
| source / vignettes | OK | 156 | ||
| linux-release | OK | 161 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| PGC GWAS Dataset and Annotation Dataset | exampleData |