Package: ginmappeR 1.3.3
Fernando Sola
ginmappeR: Gene Identifier Mapper
Provides functionalities to translate gene or protein identifiers between state-of-art biological databases: CARD (<https://card.mcmaster.ca/>), NCBI Protein, Nucleotide and Gene (<https://www.ncbi.nlm.nih.gov/>), UniProt (<https://www.uniprot.org/>) and KEGG (<https://www.kegg.jp>). Also offers complementary functionality like NCBI identical proteins or UniProt similar genes clusters retrieval.
Authors:
ginmappeR_1.3.3.tar.gz
ginmappeR_1.3.3.zip(r-4.5)ginmappeR_1.3.3.zip(r-4.4)ginmappeR_1.3.3.zip(r-4.3)
ginmappeR_1.3.3.tgz(r-4.4-any)ginmappeR_1.3.3.tgz(r-4.3-any)
ginmappeR_1.3.3.tar.gz(r-4.5-noble)ginmappeR_1.3.3.tar.gz(r-4.4-noble)
ginmappeR_1.3.3.tgz(r-4.4-emscripten)ginmappeR_1.3.3.tgz(r-4.3-emscripten)
ginmappeR.pdf |ginmappeR.html✨
ginmappeR/json (API)
NEWS
| # Install 'ginmappeR' in R: |
| install.packages('ginmappeR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ginmappeR-1.3.2(bioc 3.21)ginmappeR-1.2.2(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
annotationkegggeneticsthirdpartyclientsoftware
Last updated 16 days agofrom:2c546aeda4. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 03 2024 |
| R-4.5-win | NOTE | Dec 03 2024 |
| R-4.5-linux | NOTE | Dec 03 2024 |
| R-4.4-win | NOTE | Dec 03 2024 |
| R-4.4-mac | NOTE | Dec 03 2024 |
| R-4.3-win | NOTE | Dec 03 2024 |
| R-4.3-mac | NOTE | Dec 03 2024 |
Exports:changeCARDPathgetCARD2KEGGgetCARD2NCBIGenegetCARD2NCBINucleotidegetCARD2NCBIProteingetCARD2UniProtgetCARDVersiongetKEGG2CARDgetKEGG2NCBIGenegetKEGG2NCBINucleotidegetKEGG2NCBIProteingetKEGG2UniProtgetKEGGVersiongetNCBIGene2CARDgetNCBIGene2KEGGgetNCBIGene2NCBINucleotidegetNCBIGene2NCBIProteingetNCBIGene2UniProtgetNCBIIdenticalProteinsgetNCBINucleotide2CARDgetNCBINucleotide2KEGGgetNCBINucleotide2NCBIGenegetNCBINucleotide2NCBIProteingetNCBINucleotide2UniProtgetNCBIProtein2CARDgetNCBIProtein2KEGGgetNCBIProtein2NCBIGenegetNCBIProtein2NCBINucleotidegetNCBIProtein2UniProtgetNCBIVersiongetUniProt2CARDgetUniProt2KEGGgetUniProt2NCBIGenegetUniProt2NCBINucleotidegetUniProt2NCBIProteingetUniProtSimilarGenesgetUniProtVersionupdateCARDDataBase
Dependencies:AnnotationDbiaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdigestdplyrfansifastmapfilelockgenericsGenomeInfoDbGenomeInfoDbDatagluehmshttpcachehttrIRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigplogrpngprettyunitsprogresspurrrR6rentrezrjsonconsrlangRSQLitervestS4VectorsselectrstringistringrsystibbletidyrtidyselectUCSC.utilsUniProt.wsutf8vctrswithrXMLxml2XVectorzlibbioc
