{
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  "Package": "ginmappeR",
  "Type": "Package",
  "Title": "Gene Identifier Mapper",
  "Version": "1.9.0",
  "Authors@R": "c(\nperson(\"Fernando\", \"Sola\", email = \"fsola@us.es\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-1685-3270\")),\nperson(\"Daniel\", \"Ayala\", email = \"dayala1@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0003-2095-1009\")),\nperson(\"Marina\", \"Pulido\", email = \"mpulido-ibis@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0003-1633-4294\")),\nperson(\"Rafael\", \"Ayala\", email = \"rafael.ayala@oist.jp\", role = \"aut\", comment = c(ORCID = \"0000-0002-9332-4623\")),\nperson(\"Lorena\", \"López-Cerero\", email = \"llopez@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0001-8950-4384\")),\nperson(\"Inma\", \"Hernández\", email = \"inmahernandez@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0001-8920-6635\")),\nperson(\"David\", \"Ruiz\", email = \"druiz@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0003-4460-5493\")))",
  "Description": "Provides functionalities to translate gene or protein\nidentifiers between state-of-art biological databases: CARD\n(<https://card.mcmaster.ca/>), NCBI Protein, Nucleotide and\nGene (<https://www.ncbi.nlm.nih.gov/>), UniProt\n(<https://www.uniprot.org/>) and KEGG (<https://www.kegg.jp>).\nAlso offers complementary functionality like NCBI identical\nproteins or UniProt similar genes clusters retrieval.",
  "License": "GPL-3 + file LICENSE",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "biocViews": "Annotation, KEGG, Genetics, ThirdPartyClient, Software",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libxml2-dev libssl-dev\nzlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 13:02:35 UTC",
  "RemoteUrl": "https://github.com/bioc/ginmappeR",
  "RemoteRef": "HEAD",
  "RemoteSha": "1d391948b93cf9f74d66a0a4e860350508b1c358",
  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "Author": "Fernando Sola [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-1685-3270>),\nDaniel Ayala [aut] (ORCID: <https://orcid.org/0000-0003-2095-1009>),\nMarina Pulido [aut] (ORCID: <https://orcid.org/0000-0003-1633-4294>),\nRafael Ayala [aut] (ORCID: <https://orcid.org/0000-0002-9332-4623>),\nLorena López-Cerero [aut] (ORCID:\n<https://orcid.org/0000-0001-8950-4384>),\nInma Hernández [aut] (ORCID: <https://orcid.org/0000-0001-8920-6635>),\nDavid Ruiz [aut] (ORCID: <https://orcid.org/0000-0003-4460-5493>)",
  "Maintainer": "Fernando Sola <fsola@us.es>",
  "_user": "bioc",
  "_type": "src",
  "_file": "ginmappeR_1.9.0.tar.gz",
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  "_expires": "2027-01-14T09:30:55.000Z",
  "_created": "2026-10-06T09:21:16.000Z",
  "_published": "2026-10-06T09:30:57.141Z",
  "_bioccheck": {
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    "warning": 0,
    "note": 16
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  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/37441661131",
  "_status": "success",
  "_upstream": "https://github.com/bioc/ginmappeR",
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    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777381355
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  "_maintainer": {
    "name": "Fernando Sola",
    "email": "fsola@us.es",
    "login": "fersolesp",
    "description": "Computer Science PhD student at University of Seville",
    "uuid": 56033430,
    "orcid": "0000-0003-1685-3270"
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  "_realowner": "bioc",
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  "_exports": [
    "changeCARDPath",
    "getCARD2KEGG",
    "getCARD2NCBIGene",
    "getCARD2NCBINucleotide",
    "getCARD2NCBIProtein",
    "getCARD2UniProt",
    "getCARDVersion",
    "getKEGG2CARD",
    "getKEGG2NCBIGene",
    "getKEGG2NCBINucleotide",
    "getKEGG2NCBIProtein",
    "getKEGG2UniProt",
    "getKEGGVersion",
    "getNCBIGene2CARD",
    "getNCBIGene2KEGG",
    "getNCBIGene2NCBINucleotide",
    "getNCBIGene2NCBIProtein",
    "getNCBIGene2UniProt",
    "getNCBIIdenticalProteins",
    "getNCBINucleotide2CARD",
    "getNCBINucleotide2KEGG",
    "getNCBINucleotide2NCBIGene",
    "getNCBINucleotide2NCBIProtein",
    "getNCBINucleotide2UniProt",
    "getNCBIProtein2CARD",
    "getNCBIProtein2KEGG",
    "getNCBIProtein2NCBIGene",
    "getNCBIProtein2NCBINucleotide",
    "getNCBIProtein2UniProt",
    "getNCBIVersion",
    "getUniProt2CARD",
    "getUniProt2KEGG",
    "getUniProt2NCBIGene",
    "getUniProt2NCBINucleotide",
    "getUniProt2NCBIProtein",
    "getUniProtSimilarGenes",
    "getUniProtVersion",
    "updateCARDDataBase"
  ],
  "_help": [
    {
      "page": "changeCARDPath",
      "title": "Change path to download CARD database",
      "topics": [
        "changeCARDPath"
      ]
    },
    {
      "page": "getCARD2KEGG",
      "title": "Translates a CARD database ID to KEGG database",
      "topics": [
        "getCARD2KEGG"
      ]
    },
    {
      "page": "getCARD2NCBIGene",
      "title": "Translates a CARD database ID to NCBI Gene database",
      "topics": [
        "getCARD2NCBIGene"
      ]
    },
    {
      "page": "getCARD2NCBINucleotide",
      "title": "Translates a CARD database ID to NCBI Nucleotide database",
      "topics": [
        "getCARD2NCBINucleotide"
      ]
    },
    {
      "page": "getCARD2NCBIProtein",
      "title": "Translates a CARD database ID to NCBI Protein database",
      "topics": [
        "getCARD2NCBIProtein"
      ]
    },
    {
      "page": "getCARD2UniProt",
      "title": "Translates a CARD database ID to UniProt database",
      "topics": [
        "getCARD2UniProt"
      ]
    },
    {
      "page": "getCARDVersion",
      "title": "Prints CARD database version being used",
      "topics": [
        "getCARDVersion"
      ]
    },
    {
      "page": "getKEGG2CARD",
      "title": "Translates a KEGG database ID to CARD database",
      "topics": [
        "getKEGG2CARD"
      ]
    },
    {
      "page": "getKEGG2NCBIGene",
      "title": "Translates a KEGG database ID to NCBI Gene database",
      "topics": [
        "getKEGG2NCBIGene"
      ]
    },
    {
      "page": "getKEGG2NCBINucleotide",
      "title": "Translates a KEGG database ID to NCBI Nucleotide database",
      "topics": [
        "getKEGG2NCBINucleotide"
      ]
    },
    {
      "page": "getKEGG2NCBIProtein",
      "title": "Translates a KEGG database ID to NCBI Protein database",
      "topics": [
        "getKEGG2NCBIProtein"
      ]
    },
    {
      "page": "getKEGG2UniProt",
      "title": "Translates a KEGG Genes database ID to UniProt database",
      "topics": [
        "getKEGG2UniProt"
      ]
    },
    {
      "page": "getKEGGVersion",
      "title": "Prints KEGG database version being used",
      "topics": [
        "getKEGGVersion"
      ]
    },
    {
      "page": "getNCBIGene2CARD",
      "title": "Translates a NCBI Gene database ID to CARD database",
      "topics": [
        "getNCBIGene2CARD"
      ]
    },
    {
      "page": "getNCBIGene2KEGG",
      "title": "Translates a NCBI Gene database ID to KEGG database",
      "topics": [
        "getNCBIGene2KEGG"
      ]
    },
    {
      "page": "getNCBIGene2NCBINucleotide",
      "title": "Translates a NCBI Gene database ID to NCBI Nucleotide database",
      "topics": [
        "getNCBIGene2NCBINucleotide"
      ]
    },
    {
      "page": "getNCBIGene2NCBIProtein",
      "title": "Translates a NCBI Gene database ID to NCBI Protein database",
      "topics": [
        "getNCBIGene2NCBIProtein"
      ]
    },
    {
      "page": "getNCBIGene2UniProt",
      "title": "Translates a NCBI Gene database ID to UniProt database",
      "topics": [
        "getNCBIGene2UniProt"
      ]
    },
    {
      "page": "getNCBIIdenticalProteins",
      "title": "Search NCBI Identical Protein database by a given NCBI ID",
      "topics": [
        "getNCBIIdenticalProteins"
      ]
    },
    {
      "page": "getNCBINucleotide2CARD",
      "title": "Translates a NCBI Nucleotide database ID to CARD database",
      "topics": [
        "getNCBINucleotide2CARD"
      ]
    },
    {
      "page": "getNCBINucleotide2KEGG",
      "title": "Translates a NCBI Nucleotide database ID to KEGG database",
      "topics": [
        "getNCBINucleotide2KEGG"
      ]
    },
    {
      "page": "getNCBINucleotide2NCBIGene",
      "title": "Translates a NCBI Nucleotide database ID to NCBI Gene database",
      "topics": [
        "getNCBINucleotide2NCBIGene"
      ]
    },
    {
      "page": "getNCBINucleotide2NCBIProtein",
      "title": "Translates a NCBI Nucleotide database ID to NCBI Protein database",
      "topics": [
        "getNCBINucleotide2NCBIProtein"
      ]
    },
    {
      "page": "getNCBINucleotide2UniProt",
      "title": "Translates a NCBI Nucleotide database ID to UniProt database",
      "topics": [
        "getNCBINucleotide2UniProt"
      ]
    },
    {
      "page": "getNCBIProtein2CARD",
      "title": "Translates a NCBI Protein database ID to CARD database",
      "topics": [
        "getNCBIProtein2CARD"
      ]
    },
    {
      "page": "getNCBIProtein2KEGG",
      "title": "Translates a NCBI Protein database ID to KEGG database",
      "topics": [
        "getNCBIProtein2KEGG"
      ]
    },
    {
      "page": "getNCBIProtein2NCBIGene",
      "title": "Translates a NCBI Protein database ID to NCBI Gene database",
      "topics": [
        "getNCBIProtein2NCBIGene"
      ]
    },
    {
      "page": "getNCBIProtein2NCBINucleotide",
      "title": "Translates a NCBI Protein database ID to NCBI Nucleotide database",
      "topics": [
        "getNCBIProtein2NCBINucleotide"
      ]
    },
    {
      "page": "getNCBIProtein2UniProt",
      "title": "Translates a NCBI Protein database ID to UniProt database",
      "topics": [
        "getNCBIProtein2UniProt"
      ]
    },
    {
      "page": "getNCBIVersion",
      "title": "Prints NCBI databases versions being used",
      "topics": [
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      ]
    },
    {
      "page": "getUniProt2CARD",
      "title": "Translates an UniProt database ID to CARD database",
      "topics": [
        "getUniProt2CARD"
      ]
    },
    {
      "page": "getUniProt2KEGG",
      "title": "Translates an UniProt database ID to KEGG database",
      "topics": [
        "getUniProt2KEGG"
      ]
    },
    {
      "page": "getUniProt2NCBIGene",
      "title": "Translates an UniProt database ID to NCBI Gene database",
      "topics": [
        "getUniProt2NCBIGene"
      ]
    },
    {
      "page": "getUniProt2NCBINucleotide",
      "title": "Translates an UniProt database ID to NCBI Nucleotide database",
      "topics": [
        "getUniProt2NCBINucleotide"
      ]
    },
    {
      "page": "getUniProt2NCBIProtein",
      "title": "Translates an UniProt database ID to NCBI Protein database",
      "topics": [
        "getUniProt2NCBIProtein"
      ]
    },
    {
      "page": "getUniProtSimilarGenes",
      "title": "Get similar UniProt genes by a given identity percentage",
      "topics": [
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      ]
    },
    {
      "page": "getUniProtVersion",
      "title": "Prints UniProt database version being used",
      "topics": [
        "getUniProtVersion"
      ]
    },
    {
      "page": "updateCARDDataBase",
      "title": "Downloads the most up-to-date version of CARD database",
      "topics": [
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      ]
    }
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