Package: geneRecommender 1.85.0
Greg Hather
geneRecommender: A gene recommender algorithm to identify genes coexpressed with a query set of genes
This package contains a targeted clustering algorithm for the analysis of microarray data. The algorithm can aid in the discovery of new genes with similar functions to a given list of genes already known to have closely related functions.
Authors:
geneRecommender_1.85.0.tar.gz
geneRecommender_1.85.0.zip(r-4.7)geneRecommender_1.85.0.zip(r-4.6)geneRecommender_1.85.0.zip(r-4.5)
geneRecommender_1.85.0.tgz(r-4.6-any)geneRecommender_1.85.0.tgz(r-4.5-any)
geneRecommender_1.85.0.tar.gz(r-4.7-any)geneRecommender_1.85.0.tar.gz(r-4.6-any)
geneRecommender_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
geneRecommender/json (API)
| # Install 'geneRecommender' in R: |
| install.packages('geneRecommender', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:geneRecommender-1.85.0(bioc 3.24)geneRecommender-1.84.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:8b7c73eb32. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 138 | ||
| linux-devel-x86_64 | NOTE | 184 | ||
| source / vignettes | OK | 147 | ||
| linux-release-x86_64 | NOTE | 116 | ||
| macos-release-arm64 | NOTE | 66 | ||
| macos-oldrel-arm64 | NOTE | 70 | ||
| windows-devel | NOTE | 72 | ||
| windows-release | NOTE | 65 | ||
| windows-oldrel | NOTE | 74 | ||
| wasm-release | OK | 96 |
Exports:gr.cvgr.maingr.normalize
Dependencies:BiobaseBiocGenericsgenerics
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| A function for cross validation | gr.cv |
| A gene recommender algorithm to identify genes coexpressed with a query set of genes | gr.main |
| A function for normalization | gr.normalize |
