Package: flowGate 1.13.0

Andrew Wight

flowGate: Interactive Cytometry Gating in R

flowGate adds an interactive Shiny app to allow manual GUI-based gating of flow cytometry data in R. Using flowGate, you can draw 1D and 2D span/rectangle gates, quadrant gates, and polygon gates on flow cytometry data by interactively drawing the gates on a plot of your data, rather than by specifying gate coordinates. This package is especially geared toward wet-lab cytometerists looking to take advantage of R for cytometry analysis, without necessarily having a lot of R experience.

Authors:Andrew Wight [aut, cre], Harvey Cantor [aut, ldr]

flowGate_1.13.0.tar.gz
flowGate_1.13.0.zip(r-4.7)flowGate_1.13.0.zip(r-4.6)flowGate_1.13.0.zip(r-4.5)
flowGate_1.13.0.tgz(r-4.6-any)flowGate_1.13.0.tgz(r-4.5-any)
flowGate_1.13.0.tar.gz(r-4.7-any)flowGate_1.13.0.tar.gz(r-4.6-any)
flowGate_1.13.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
flowGate/json (API)
NEWS

# Install 'flowGate' in R:
install.packages('flowGate', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:flowGate-1.13.0(bioc 3.24)flowGate-1.12.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwareworkflowstepflowcytometrypreprocessingimmunooncologydataimport

4.00 score 9 scripts 333 downloads 3 exports 82 dependencies

Last updated from:db2e1b1e2a. Checks:8 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE180
linux-devel-x86_64NOTE257
source / vignettesOK234
linux-release-x86_64NOTE295
macos-release-arm64NOTE118
macos-oldrel-arm64NOTE105
windows-develNOTE169
windows-releaseNOTE157
windows-oldrelNOTE152
wasm-releaseOK171

Exports:gs_apply_gating_strategygs_gate_interactivegs_gate_transform_interactive

Dependencies:abindbase64encBHBiobaseBiocGenericsbiocmakeBiocManagerbslibcachemclicommonmarkcpp11cytolibdata.tableDelayedArraydigestdir.expirydplyrfarverfastmapfilelockflowCoreflowWorkspacefontawesomefsgenericsggcytoggplot2gluegraphgridExtragtablehexbinhtmltoolshttpuvIRangesisobandjquerylibjsonlitelabelinglaterlatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimencdfFlowotelpillarpkgconfigplyrpromisespurrrR6rappdirsRBGLRColorBrewerRcppRgraphvizRhdf5librlangRProtoBufLibS4ArraysS4VectorsS7sassscalesshinysourcetoolsSparseArraytibbletidyselectutf8vctrsviridisLitewithrXMLxtableXVector

flowGate

Rendered fromflowGate.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2023-03-15
Started: 2020-12-11