Package: fdrame 1.85.0

Effi Kenigsberg

fdrame: FDR adjustments of Microarray Experiments (FDR-AME)

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

Authors:Yoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli

fdrame_1.85.0.tar.gz
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fdrame_1.85.0.tgz(r-4.6-x86_64)fdrame_1.85.0.tgz(r-4.6-arm64)fdrame_1.85.0.tgz(r-4.5-x86_64)fdrame_1.85.0.tgz(r-4.5-arm64)
fdrame_1.85.0.tar.gz(r-4.7-arm64)fdrame_1.85.0.tar.gz(r-4.7-x86_64)fdrame_1.85.0.tar.gz(r-4.6-arm64)fdrame_1.85.0.tar.gz(r-4.6-x86_64)
fdrame_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
fdrame/json (API)

# Install 'fdrame' in R:

install.packages('fdrame', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

design - Experimental design
exp.arr - Normalized Expression Array

On BioConductor:fdrame-1.85.0(bioc 3.24)fdrame-1.84.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarray differentialexpression multiplecomparison

3.30 score 400 downloads 35 exports 0 dependencies

Last updated from:ec88f73bd3. Checks:1 ERROR, 11 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	ERROR	132
linux-devel-arm64	NOTE	111
linux-devel-x86_64	NOTE	122
source / vignettes	OK	138
linux-release-arm64	NOTE	126
linux-release-x86_64	NOTE	168
macos-release-arm64	NOTE	83
macos-release-x86_64	NOTE	156
macos-oldrel-arm64	NOTE	88
macos-oldrel-x86_64	NOTE	166
windows-devel	NOTE	73
windows-release	NOTE	59
windows-oldrel	NOTE	84
wasm-release	OK	72