Package: fdrame 1.79.0

Effi Kenigsberg

fdrame: FDR adjustments of Microarray Experiments (FDR-AME)

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

Authors:Yoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli

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fdrame.pdf |fdrame.html✨
fdrame/json (API)

# Install 'fdrame' in R:

install.packages('fdrame', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

design - Experimental design
exp.arr - Normalized Expression Array

On BioConductor:fdrame-1.77.0(bioc 3.20)fdrame-1.76.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarray differentialexpression multiplecomparison

3.30 score 248 downloads 35 exports 0 dependencies

Last updated 23 days agofrom:0ca535309e. Checks:OK: 1 NOTE: 8. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Oct 30 2024
R-4.5-win-x86_64	NOTE	Oct 30 2024
R-4.5-linux-x86_64	NOTE	Oct 30 2024
R-4.4-win-x86_64	NOTE	Oct 30 2024
R-4.4-mac-x86_64	NOTE	Oct 30 2024
R-4.4-mac-aarch64	NOTE	Oct 30 2024
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