Package: derfinderHelper 1.47.0
derfinderHelper: derfinder helper package
Helper package for speeding up the derfinder package when using multiple cores. This package is particularly useful when using BiocParallel and it helps reduce the time spent loading the full derfinder package when running the F-statistics calculation in parallel.
Authors:
derfinderHelper_1.47.0.tar.gz
derfinderHelper_1.47.0.zip(r-4.7)derfinderHelper_1.47.0.zip(r-4.6)derfinderHelper_1.47.0.zip(r-4.5)
derfinderHelper_1.47.0.tgz(r-4.6-any)derfinderHelper_1.47.0.tgz(r-4.5-any)
derfinderHelper_1.47.0.tar.gz(r-4.7-any)derfinderHelper_1.47.0.tar.gz(r-4.6-any)
derfinderHelper_1.47.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
derfinderHelper/json (API)
NEWS
| # Install 'derfinderHelper' in R: |
| install.packages('derfinderHelper', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/leekgroup/derfinderhelper/issues
On BioConductor:derfinderHelper-1.47.0(bioc 3.24)derfinderHelper-1.46.0(bioc 3.23)
differentialexpressionsequencingrnaseqsoftwareimmunooncologybioconductorderfinder
Last updated from:b9a9c2e6d8. Checks:1 NOTE, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | NOTE | 137 | ||
| linux-devel-x86_64 | OK | 180 | ||
| source / vignettes | OK | 169 | ||
| linux-release-x86_64 | OK | 253 | ||
| macos-release-arm64 | OK | 109 | ||
| macos-oldrel-arm64 | OK | 97 | ||
| windows-devel | OK | 105 | ||
| windows-release | OK | 132 | ||
| windows-oldrel | OK | 107 | ||
| wasm-release | OK | 108 |
Exports:fstats.apply
Dependencies:BiocGenericsgenericsIRangeslatticeMatrixS4Vectors
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate F-statistics per base by extracting chunks from a DataFrame | fstats.apply |
