Package: derfinderHelper 1.41.0

Leonardo Collado-Torres

derfinderHelper: derfinder helper package

Helper package for speeding up the derfinder package when using multiple cores. This package is particularly useful when using BiocParallel and it helps reduce the time spent loading the full derfinder package when running the F-statistics calculation in parallel.

Authors:Leonardo Collado-Torres [aut, cre], Andrew E. Jaffe [aut], Jeffrey T. Leek [aut, ths]

derfinderHelper_1.41.0.tar.gz
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derfinderHelper.pdf |derfinderHelper.html
derfinderHelper/json (API)
NEWS

# Install 'derfinderHelper' in R:
install.packages('derfinderHelper', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/leekgroup/derfinderhelper/issues

On BioConductor:derfinderHelper-1.41.0(bioc 3.21)derfinderHelper-1.40.0(bioc 3.20)

differentialexpressionsequencingrnaseqsoftwareimmunooncologybioconductorderfinder

6.20 score 7 packages 850 downloads 1 exports 6 dependencies

Last updated 4 months agofrom:4dbfb34928. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 13 2025
R-4.5-winOKMar 13 2025
R-4.5-macOKMar 13 2025
R-4.5-linuxOKMar 13 2025
R-4.4-winOKMar 13 2025
R-4.4-macOKMar 13 2025
R-4.4-linuxOKMar 13 2025
R-4.3-winOKMar 13 2025
R-4.3-macOKMar 13 2025

Exports:fstats.apply

Dependencies:BiocGenericsgenericsIRangeslatticeMatrixS4Vectors

Introduction to derfinderHelper

Rendered fromderfinderHelper.Rmdusingknitr::rmarkdownon Mar 13 2025.

Last update: 2024-12-12
Started: 2014-09-23