Package: dStruct 1.13.0
Krishna Choudhary
dStruct: Identifying differentially reactive regions from RNA structurome profiling data
dStruct identifies differentially reactive regions from RNA structurome profiling data. dStruct is compatible with a broad range of structurome profiling technologies, e.g., SHAPE-MaP, DMS-MaPseq, Structure-Seq, SHAPE-Seq, etc. See Choudhary et al., Genome Biology, 2019 for the underlying method.
Authors:
dStruct_1.13.0.tar.gz
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dStruct_1.13.0.tgz(r-4.4-any)dStruct_1.13.0.tgz(r-4.3-any)
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dStruct.pdf |dStruct.html✨
dStruct/json (API)
NEWS
| # Install 'dStruct' in R: |
| install.packages('dStruct', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/datamaster-kris/dstruct/issues
On BioConductor:dStruct-1.13.0(bioc 3.21)dStruct-1.12.0(bioc 3.20)
statisticalmethodstructuralpredictionsequencingsoftware
Last updated 2 months agofrom:32829a312a. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 29 2024 |
| R-4.5-win | NOTE | Nov 29 2024 |
| R-4.5-linux | NOTE | Nov 29 2024 |
| R-4.4-win | NOTE | Nov 29 2024 |
| R-4.4-mac | NOTE | Nov 29 2024 |
| R-4.3-win | NOTE | Nov 29 2024 |
| R-4.3-mac | NOTE | Nov 29 2024 |
Exports:calcDisdCombsdStructdStructGuideddStructomegetCombsgetContigRegionsgetRegionsnormalizerplotDStructurometwoEightNormalize
Dependencies:BiocGenericsclicolorspacefansifarvergenericsggplot2gluegtableIRangesisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrpurrrR6RColorBrewerRcppreshape2rlangS4Vectorsscalesstringistringrtibbleutf8vctrsviridisLitewithrzoo
