Package: bioDist 1.85.0

Bioconductor Package Maintainer

bioDist: Different distance measures

A collection of software tools for calculating distance measures.

Authors:B. Ding, R. Gentleman and Vincent Carey

bioDist_1.85.0.tar.gz
bioDist_1.85.0.zip(r-4.7)bioDist_1.85.0.zip(r-4.6)bioDist_1.85.0.zip(r-4.5)
bioDist_1.85.0.tgz(r-4.6-any)bioDist_1.85.0.tgz(r-4.5-any)
bioDist_1.85.0.tar.gz(r-4.7-any)bioDist_1.85.0.tar.gz(r-4.6-any)
bioDist_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
bioDist/json (API)

# Install 'bioDist' in R:
install.packages('bioDist', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:bioDist-1.85.0(bioc 3.24)bioDist-1.84.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

clusteringclassification

6.10 score 3 packages 70 scripts 668 downloads 15 mentions 10 exports 4 dependencies

Last updated from:d6535cd824. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR134
linux-devel-x86_64NOTE156
source / vignettesOK164
linux-release-x86_64NOTE151
macos-release-arm64NOTE102
macos-oldrel-arm64NOTE81
windows-develNOTE91
windows-releaseNOTE81
windows-oldrelNOTE74
wasm-releaseOK95

Exports:closest.topcor.disteucKLD.matrixKLdist.matrixmanMIdistmutualInfospearman.disttau.dist

Dependencies:BiobaseBiocGenericsgenericsKernSmooth

bioDist Introduction

Rendered frombioDist.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2013-10-25
Started: 2013-10-25

Readme and manuals

Help Manual

Help pageTopics
Find the closest genes.closest.top
Pearson correlational distancecor.dist cor.dist,eSet-method cor.dist,matrix-method
Euclidean distanceeuc euc,eSet-method euc,matrix-method
Continuous version of Kullback-Leibler Distance (KLD)KLD.matrix KLD.matrix,eSet-method KLD.matrix,list-method KLD.matrix,matrix-method
Discrete version of Kullback-Leibler Distance (KLD)KLdist.matrix KLdist.matrix,eSet-method KLdist.matrix,list-method KLdist.matrix,matrix-method
Manhattan distanceman man,eSet-method man,matrix-method
Mutual InformationMIdist MIdist,ExpressionSet-method MIdist,matrix-method mutualInfo mutualInfo,ExpressionSet-method mutualInfo,matrix-method
Spearman correlational distancespearman.dist spearman.dist,ExpressionSet-method spearman.dist,matrix-method
Kendall's tau correlational distancetau.dist tau.dist,ExpressionSet-method tau.dist,matrix-method