Package: bettr 1.9.0

Charlotte Soneson

bettr: A Better Way To Explore What Is Best

bettr provides a set of interactive visualization methods to explore the results of a benchmarking study, where typically more than a single performance measures are computed. The user can weight the performance measures according to their preferences. Performance measures can also be grouped and aggregated according to additional annotations.

Authors:Federico Marini [aut], Charlotte Soneson [aut, cre], Daniel Incicau [aut]

bettr_1.9.0.tar.gz
bettr_1.9.0.zip(r-4.7)bettr_1.9.0.zip(r-4.6)bettr_1.9.0.zip(r-4.5)
bettr_1.9.0.tgz(r-4.6-any)bettr_1.9.0.tgz(r-4.5-any)
bettr_1.9.0.tar.gz(r-4.7-any)bettr_1.9.0.tar.gz(r-4.6-any)
bettr_1.9.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
bettr/json (API)
NEWS

# Install 'bettr' in R:

install.packages('bettr', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/federicomarini/bettr/issues

On BioConductor:bettr-1.9.0(bioc 3.24)bettr-1.8.0(bioc 3.23)

visualization shinyapps gui

6.21 score 5 stars 18 scripts 238 downloads 9 exports 114 dependencies

Last updated from:72774f7cd0. Checks:1 NOTE, 9 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	200
linux-devel-x86_64	OK	481
source / vignettes	OK	254
linux-release-x86_64	OK	332
macos-release-arm64	OK	195
macos-oldrel-arm64	OK	193
windows-devel	OK	249
windows-release	OK	234
windows-oldrel	OK	270
wasm-release	OK	142

Exports:assembleSE bettr bettrFromJSON bettrGetReady bettrToJSON makeBarPolarPlot makeHeatmap makeParCoordPlot makePolarPlot

Dependencies:abind assertthat backports base64enc Biobase BiocGenerics bslib cachem checkmate circlize cli clue cluster codetools colorspace commonmark ComplexHeatmap cowplot cpp11 crayon crosstalk data.table DelayedArray digest doParallel dplyr DT evaluate farver fastmap fontawesome foreach foreign Formula fs generics GenomicRanges GetoptLong ggplot2 GlobalOptions glue gridExtra gtable highr Hmisc htmlTable htmltools htmlwidgets httpuv IRanges isoband iterators jquerylib jsonlite knitr labeling later lattice lazyeval learnr lifecycle litedown magrittr markdown Matrix MatrixGenerics matrixStats memoise mime nnet otel pillar pkgconfig png promises purrr R6 rappdirs RColorBrewer Rcpp renv rjson rlang rmarkdown rpart rprojroot rstudioapi S4Arrays S4Vectors S7 sass scales Seqinfo shape shiny shinyjqui sortable sourcetools SparseArray stringi stringr SummarizedExperiment tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun xtable XVector yaml

bettr

Charlotte Soneson & Federico Marini

Rendered frombettr.Rmdusingknitr::rmarkdownon Jun 10 2026.

Last update: 2025-11-16
Started: 2023-10-15

Server Mode Guide for bettr

bettr package authors

Rendered fromserver-mode.Rmdusingknitr::rmarkdownon Jun 10 2026.

Last update: 2025-11-16
Started: 2025-11-16

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Assemble all bettr input into a SummarizedExperiment object	assembleSE
Launch bettr app to explore and aggregate performance metrics	bettr
Import bettr data from JSON format	bettrFromJSON
Prepare data for plotting with bettr	bettrGetReady
Export SummarizedExperiment to bettr JSON format	bettrToJSON
Create a bar/polar plot	makeBarPolarPlot
Create a summary heatmap	makeHeatmap
Create a parallel coordinates plot	makeParCoordPlot
Create a polar plot	makePolarPlot