Package: bettr 1.9.0

Charlotte Soneson

bettr: A Better Way To Explore What Is Best

bettr provides a set of interactive visualization methods to explore the results of a benchmarking study, where typically more than a single performance measures are computed. The user can weight the performance measures according to their preferences. Performance measures can also be grouped and aggregated according to additional annotations.

Authors:Federico Marini [aut], Charlotte Soneson [aut, cre], Daniel Incicau [aut]

bettr_1.9.0.tar.gz
bettr_1.9.0.zip(r-4.7)bettr_1.9.0.zip(r-4.6)bettr_1.9.0.zip(r-4.5)
bettr_1.9.0.tgz(r-4.6-any)bettr_1.9.0.tgz(r-4.5-any)
bettr_1.9.0.tar.gz(r-4.7-any)bettr_1.9.0.tar.gz(r-4.6-any)
bettr_1.9.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
bettr/json (API)

# Install 'bettr' in R:
install.packages('bettr', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/federicomarini/bettr/issues

On BioConductor:bettr-1.9.0(bioc 3.24)bettr-1.8.0(bioc 3.23)

visualizationshinyappsgui

6.21 score 5 stars 18 scripts 238 downloads 9 exports 114 dependencies

Last updated from:72774f7cd0. Checks:1 WARNING, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING206
linux-devel-x86_64OK328
source / vignettesOK290
linux-release-x86_64OK327
macos-release-arm64OK207
macos-oldrel-arm64OK206
windows-develOK243
windows-releaseOK244
windows-oldrelOK283
wasm-releaseOK138

Exports:assembleSEbettrbettrFromJSONbettrGetReadybettrToJSONmakeBarPolarPlotmakeHeatmapmakeParCoordPlotmakePolarPlot

Dependencies:abindassertthatbackportsbase64encBiobaseBiocGenericsbslibcachemcheckmatecirclizecliclueclustercodetoolscolorspacecommonmarkComplexHeatmapcowplotcpp11crayoncrosstalkdata.tableDelayedArraydigestdoParalleldplyrDTevaluatefarverfastmapfontawesomeforeachforeignFormulafsgenericsGenomicRangesGetoptLongggplot2GlobalOptionsgluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetshttpuvIRangesisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelazyevallearnrlifecyclelitedownmagrittrmarkdownMatrixMatrixGenericsmatrixStatsmemoisemimennetotelpillarpkgconfigpngpromisespurrrR6rappdirsRColorBrewerRcpprenvrjsonrlangrmarkdownrpartrprojrootrstudioapiS4ArraysS4VectorsS7sassscalesSeqinfoshapeshinyshinyjquisortablesourcetoolsSparseArraystringistringrSummarizedExperimenttibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableXVectoryaml

bettr
Introduction | Installation | Usage | Example - single-cell RNA-seq clustering benchmark | Programmatic interface | Exporting data from the app | Additional examples | Session info
Rendered frombettr.Rmdusingknitr::rmarkdown

Last update: 2025-11-16
Started: 2023-10-15

Server Mode Guide for bettr
Overview | What's New in Version 1.6.0 | Server Mode for JSON Uploads | JSON Serialization | Browser localStorage Caching | Cache Versioning | URL Parameters for Programmatic Loading | Server Mode Basics | Starting a Server | What Happens When You Start Server Mode | User Interface | Creating JSON Files | From Data Frames | From Existing SummarizedExperiment | Reading JSON Files | Two Loading Methods | Load from URL (jsonUrl) | Load from File Path (jsonFile) | Browser Cache Management | How Caching Works | Manual Cache Control | Clear Cache Button | Cache Versioning (Administrators) | Setting Up Versioning | Version String Format | User Experience | Session info
Rendered fromserver-mode.Rmdusingknitr::rmarkdown

Last update: 2025-11-16
Started: 2025-11-16