Package: bacon 1.33.0
bacon: Controlling bias and inflation in association studies using the empirical null distribution
Bacon can be used to remove inflation and bias often observed in epigenome- and transcriptome-wide association studies. To this end bacon constructs an empirical null distribution using a Gibbs Sampling algorithm by fitting a three-component normal mixture on z-scores.
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bacon/json (API)
NEWS
# Install 'bacon' in R: |
install.packages('bacon', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:bacon-1.33.0(bioc 3.20)bacon-1.32.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:b34506f93a
Exports:baconbiasdnormmixesestimatesfitinflationmetaplotplotnormmixposteriorspvalrnormmixsetopTabletraceststat
Dependencies:BHBiocParallelclicodetoolscolorspacecpp11ellipsefansifarverformatRfutile.loggerfutile.optionsggplot2gluegtableisobandlabelinglambda.rlatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalessnowtibbleutf8vctrsviridisLitewithr