Package: affyio 1.77.0
affyio: Tools for parsing Affymetrix data files
Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
Authors:
affyio_1.77.0.tar.gz
affyio_1.77.0.zip(r-4.5)affyio_1.77.0.zip(r-4.4)affyio_1.77.0.zip(r-4.3)
affyio_1.77.0.tgz(r-4.4-x86_64)affyio_1.77.0.tgz(r-4.4-arm64)affyio_1.77.0.tgz(r-4.3-x86_64)affyio_1.77.0.tgz(r-4.3-arm64)
affyio_1.77.0.tar.gz(r-4.5-noble)affyio_1.77.0.tar.gz(r-4.4-noble)
affyio_1.77.0.tgz(r-4.4-emscripten)affyio_1.77.0.tgz(r-4.3-emscripten)
affyio.pdf |affyio.html✨
affyio/json (API)
# Install 'affyio' in R: |
install.packages('affyio', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bmbolstad/affyio/issues
On BioConductor:affyio-1.75.1(bioc 3.20)affyio-1.74.0(bioc 3.19)
microarraydataimportinfrastructure
Last updated 23 days agofrom:042a91e301. Checks:OK: 1 WARNING: 8. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 30 2024 |
R-4.5-win-x86_64 | WARNING | Oct 30 2024 |
R-4.5-linux-x86_64 | WARNING | Oct 30 2024 |
R-4.4-win-x86_64 | WARNING | Oct 30 2024 |
R-4.4-mac-x86_64 | WARNING | Oct 30 2024 |
R-4.4-mac-aarch64 | WARNING | Oct 30 2024 |
R-4.3-win-x86_64 | WARNING | Oct 30 2024 |
R-4.3-mac-x86_64 | WARNING | Oct 30 2024 |
R-4.3-mac-aarch64 | WARNING | Oct 30 2024 |
Exports:check.cdf.typeget.celfile.datesread_abatchread_abatch_stddevRead.CC.Genericread.cdffile.listread.celfileread.celfile.headerread.celfile.probeintensity.matricesRead.CYCHP
Dependencies:zlibbioc
Readme and manuals
Help Manual
Help page | Topics |
---|---|
CDF file format function | check.cdf.type |
Extract Dates from CEL files | get.celfile.dates |
Read CDF file into an R list | read.cdffile.list |
Read a CEL file into an R list | read.celfile |
Read header information from cel file | read.celfile.header |
Read PM or MM from CEL file into matrices | read.celfile.probeintensity.matrices |