Package: VectraPolarisData 1.17.0

Wrobel Julia

VectraPolarisData: Vectra Polaris and Vectra 3 multiplex single-cell imaging data

Provides two multiplex imaging datasets collected on Vectra instruments at the University of Colorado Anschutz Medical Campus. Data are provided as a Spatial Experiment objects. Data is provided in tabular form and has been segmented and phenotyped using Inform software. Raw .tiff files are not included.

Authors:Wrobel Julia [aut, cre], Tusharkanti Ghosh [aut]

VectraPolarisData_1.17.0.tar.gz
VectraPolarisData_1.17.0.tar.gz(r-4.7-any)VectraPolarisData_1.17.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
VectraPolarisData/json (API)

# Install 'VectraPolarisData' in R:

install.packages('VectraPolarisData', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/julia-wrobel/vectrapolarisdata/issues

On BioConductor:VectraPolarisData-1.17.0(data/experiment 3.24)VectraPolarisData-1.16.0(data/experiment 3.23)

experimenthub experimentdata spatialdata singlecelldata homo_sapiens_data reproducibleresearch datapkg

3.26 score 1 stars 18 scripts 2 exports 73 dependencies

Last updated from:d5a6d87bc3. Checks:1 WARNING, 3 ERROR. Indexed: yes.

This is a data package. Data packages may be large and do not get checked across all platforms.

Target	Result	Time
bioc-checks	WARNING	192
linux-devel	ERROR	-3139
source / vignettes	ERROR	237
linux-release	ERROR	-3202

Exports:HumanLungCancerV3 HumanOvarianCancerVP

Dependencies:abind AnnotationDbi AnnotationHub askpass Biobase BiocBaseUtils BiocFileCache BiocGenerics BiocManager BiocVersion Biostrings bit bit64 blob cachem cli cpp11 crayon curl DBI dbplyr DelayedArray digest dplyr ExperimentHub fastmap filelock generics GenomicRanges glue httr httr2 IRanges jsonlite KEGGREST lattice lifecycle magick magrittr Matrix MatrixGenerics matrixStats memoise mime openssl pillar pkgconfig png purrr R6 rappdirs Rcpp rjson rlang RSQLite S4Arrays S4Vectors Seqinfo SingleCellExperiment SparseArray SpatialExperiment stringi stringr SummarizedExperiment sys tibble tidyr tidyselect utf8 vctrs withr XVector yaml

Vignettes and/or manual for this package failed to build, some documents may be unavailable. Please inspect thebuild logs for more information.

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
VectraPolarisData	HumanLungCancerV3 HumanOvarianCancerVP VectraPolarisData