Package: SUITOR 1.15.0

Bill Wheeler

SUITOR: Selecting the number of mutational signatures through cross-validation

An unsupervised cross-validation method to select the optimal number of mutational signatures. A data set of mutational counts is split into training and validation data.Signatures are estimated in the training data and then used to predict the mutations in the validation data.

Authors:DongHyuk Lee [aut], Bin Zhu [aut], Bill Wheeler [cre]

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manual.pdf |manual.html✨
card.svg |card.png
SUITOR/json (API)
NEWS

# Install 'SUITOR' in R:
install.packages('SUITOR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wheelerb/suitor/issues

Datasets:

On BioConductor:SUITOR-1.15.0(bioc 3.24)SUITOR-1.14.0(bioc 3.23)

geneticssoftwaresomaticmutation

4.00 score 2 scripts 293 downloads 4 exports 25 dependencies

Last updated from:d324c91d52. Checks:4 WARNING, 9 OK, 1 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING192
linux-devel-arm64OK189
linux-devel-x86_64OK211
source / vignettesOK329
linux-release-arm64OK188
linux-release-x86_64OK238
macos-release-arm64WARNING120
macos-release-x86_64WARNING240
macos-oldrel-arm64FAIL126
macos-oldrel-x86_64WARNING219
windows-develOK135
windows-releaseOK175
windows-oldrelOK150
wasm-releaseOK175

Exports:getSummaryplotErrorssuitorsuitorExtractWH

Dependencies:BHBiocParallelclicodetoolscpp11farverformatRfutile.loggerfutile.optionsggplot2gluegtableisobandlabelinglambda.rlifecycleR6RColorBrewerrlangS7scalessnowvctrsviridisLitewithr

SUITOR: selecting the number of mutational signatures

DongHyuk Lee and Bin Zhu

Rendered fromvignette.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2022-05-10
Started: 2022-04-18