STATegRa User's Guide
Introduction | Getting Started | Omics Component Analysis | Overview | Usage | Worked example | Load data | Model Selection | Component Analysis | Plot results | Omics Clustering | The Problem | The OmicsClustering Approach | Loading the data | Computing the distance between genes by using mRNA data: the bioDistclass class | Loading the map between miRNA and genes: the bioMap class | miRNA-Surrogate gene Distances: the bioDist function | Computing weighted distances: the bioDistW function | Plots | Plotting the feature distance of each weighted combination | Plotting associated features | OmicsClustering Requirements | omicsNPC | The NPC Approach | Setting the dataTypes variable | Setting the combMethods variable | Setting the numPerms, numCores and verbose variables | Run omicsNPC analysis. | References