Package: SNPediaR 1.39.0
David Montaner
SNPediaR: Query data from SNPedia
SNPediaR provides some tools for downloading and parsing data from the SNPedia web site <http://www.snpedia.com>. The implemented functions allow users to import the wiki text available in SNPedia pages and to extract the most relevant information out of them. If some information in the downloaded pages is not automatically processed by the library functions, users can easily implement their own parsers to access it in an efficient way.
Authors:
SNPediaR_1.39.0.tar.gz
SNPediaR_1.39.0.zip(r-4.7)SNPediaR_1.39.0.zip(r-4.6)SNPediaR_1.39.0.zip(r-4.5)
SNPediaR_1.39.0.tgz(r-4.6-any)SNPediaR_1.39.0.tgz(r-4.5-any)
SNPediaR_1.39.0.tar.gz(r-4.7-any)SNPediaR_1.39.0.tar.gz(r-4.6-any)
SNPediaR_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
SNPediaR/json (API)
| # Install 'SNPediaR' in R: |
| install.packages('SNPediaR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/genometra/snpediar/issues
On BioConductor:SNPediaR-1.39.0(bioc 3.24)SNPediaR-1.38.0(bioc 3.23)
Last updated from:1da720b307. Checks:7 WARNING, 2 ERROR, 1 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 158 | ||
| linux-devel-x86_64 | WARNING | 161 | ||
| source / vignettes | ERROR | 190 | ||
| linux-release-x86_64 | WARNING | 227 | ||
| macos-release-arm64 | WARNING | 103 | ||
| macos-oldrel-arm64 | WARNING | 84 | ||
| windows-devel | WARNING | 86 | ||
| windows-release | WARNING | 78 | ||
| windows-oldrel | ERROR | 89 | ||
| wasm-release | OK | 109 |
Exports:extractGenotypeTagsextractSnpTagsextractTagsgetCategoryElementsgetPages
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Extract information form downloaded SNPedia pages. | extractGenotypeTags extractSnpTags extractTags |
| Get all elements of a given category | getCategoryElements |
| Download SNPedia pages | getPages |
