Package: SNAGEE 1.47.0

David Venet

SNAGEE: Signal-to-Noise applied to Gene Expression Experiments

Signal-to-Noise applied to Gene Expression Experiments. Signal-to-noise ratios can be used as a proxy for quality of gene expression studies and samples. The SNRs can be calculated on any gene expression data set as long as gene IDs are available, no access to the raw data files is necessary. This allows to flag problematic studies and samples in any public data set.

Authors:David Venet <[email protected]>

SNAGEE_1.47.0.tar.gz
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SNAGEE.pdf |SNAGEE.html✨
SNAGEE/json (API)

# Install 'SNAGEE' in R:
install.packages('SNAGEE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:SNAGEE-1.47.0(bioc 3.21)SNAGEE-1.46.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayonechanneltwochannelqualitycontrol

3.30 score 3 scripts 242 downloads 1 mentions 3 exports 1 dependencies

Last updated 2 months agofrom:0372fc058d. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 30 2024
R-4.5-winNOTENov 30 2024
R-4.5-linuxNOTENov 30 2024
R-4.4-winNOTENov 30 2024
R-4.4-macNOTENov 30 2024
R-4.3-winNOTENov 30 2024
R-4.3-macNOTENov 30 2024

Exports:qualSamplequalStudytoSnageeFormat

Dependencies:SNAGEEdata

SNAGEE Vignette

Rendered fromSNAGEE.Rnwusingutils::Sweaveon Nov 30 2024.

Last update: 2013-11-01
Started: 2013-11-01