Package: SNAGEE 1.47.0

David Venet

SNAGEE: Signal-to-Noise applied to Gene Expression Experiments

Signal-to-Noise applied to Gene Expression Experiments. Signal-to-noise ratios can be used as a proxy for quality of gene expression studies and samples. The SNRs can be calculated on any gene expression data set as long as gene IDs are available, no access to the raw data files is necessary. This allows to flag problematic studies and samples in any public data set.

Authors:David Venet <[email protected]>

SNAGEE_1.47.0.tar.gz
SNAGEE_1.47.0.zip(r-4.5)SNAGEE_1.47.0.zip(r-4.4)SNAGEE_1.47.0.zip(r-4.3)
SNAGEE_1.47.0.tgz(r-4.5-any)SNAGEE_1.47.0.tgz(r-4.4-any)SNAGEE_1.47.0.tgz(r-4.3-any)
SNAGEE_1.47.0.tar.gz(r-4.5-noble)SNAGEE_1.47.0.tar.gz(r-4.4-noble)
SNAGEE_1.47.0.tgz(r-4.4-emscripten)SNAGEE_1.47.0.tgz(r-4.3-emscripten)
SNAGEE.pdf |SNAGEE.html✨
SNAGEE/json (API)

# Install 'SNAGEE' in R:
install.packages('SNAGEE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:SNAGEE-1.47.0(bioc 3.21)SNAGEE-1.46.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayonechanneltwochannelqualitycontrol

3.30 score 3 scripts 261 downloads 1 mentions 3 exports 1 dependencies

Last updated 4 months agofrom:0372fc058d. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 29 2025
R-4.5-winNOTEJan 29 2025
R-4.5-macNOTEJan 29 2025
R-4.5-linuxNOTEJan 29 2025
R-4.4-winNOTEJan 29 2025
R-4.4-macNOTEJan 29 2025
R-4.3-winNOTEJan 29 2025
R-4.3-macNOTEJan 29 2025

Exports:qualSamplequalStudytoSnageeFormat

Dependencies:SNAGEEdata

SNAGEE Vignette

Rendered fromSNAGEE.Rnwusingutils::Sweaveon Jan 29 2025.

Last update: 2013-11-01
Started: 2013-11-01