Package: SNAGEE 1.47.0

David Venet

SNAGEE: Signal-to-Noise applied to Gene Expression Experiments

Signal-to-Noise applied to Gene Expression Experiments. Signal-to-noise ratios can be used as a proxy for quality of gene expression studies and samples. The SNRs can be calculated on any gene expression data set as long as gene IDs are available, no access to the raw data files is necessary. This allows to flag problematic studies and samples in any public data set.

Authors:David Venet <[email protected]>

SNAGEE_1.47.0.tar.gz
SNAGEE_1.47.0.zip(r-4.5)SNAGEE_1.47.0.zip(r-4.4)SNAGEE_1.47.0.zip(r-4.3)
SNAGEE_1.47.0.tgz(r-4.4-any)SNAGEE_1.47.0.tgz(r-4.3-any)
SNAGEE_1.47.0.tar.gz(r-4.5-noble)SNAGEE_1.47.0.tar.gz(r-4.4-noble)
SNAGEE_1.47.0.tgz(r-4.4-emscripten)SNAGEE_1.47.0.tgz(r-4.3-emscripten)
SNAGEE.pdf |SNAGEE.html✨
SNAGEE/json (API)

# Install 'SNAGEE' in R:
install.packages('SNAGEE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:SNAGEE-1.47.0(bioc 3.21)SNAGEE-1.46.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayonechanneltwochannelqualitycontrol

3.30 score 3 scripts 224 downloads 1 mentions 3 exports 1 dependencies

Last updated 23 days agofrom:0372fc058d. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 31 2024
R-4.5-winNOTEOct 31 2024
R-4.5-linuxNOTEOct 31 2024
R-4.4-winNOTEOct 31 2024
R-4.4-macNOTEOct 31 2024
R-4.3-winNOTEOct 31 2024
R-4.3-macNOTEOct 31 2024

Exports:qualSamplequalStudytoSnageeFormat

Dependencies:SNAGEEdata

SNAGEE Vignette

Rendered fromSNAGEE.Rnwusingutils::Sweaveon Oct 31 2024.

Last update: 2013-11-01
Started: 2013-11-01