Overview | Using the ResidualMatrix | Retaining certain factors | Restricting observations | Session information
Package: ResidualMatrix 1.23.0
Aaron Lun
ResidualMatrix: Creating a DelayedMatrix of Regression Residuals
Provides delayed computation of a matrix of residuals after fitting a linear model to each column of an input matrix. Also supports partial computation of residuals where selected factors are to be preserved in the output matrix. Implements a number of efficient methods for operating on the delayed matrix of residuals, most notably matrix multiplication and calculation of row/column sums or means.
Authors:
ResidualMatrix_1.23.0.tar.gz
ResidualMatrix_1.23.0.zip(r-4.7)ResidualMatrix_1.23.0.zip(r-4.6)ResidualMatrix_1.23.0.zip(r-4.5)
ResidualMatrix_1.23.0.tgz(r-4.6-any)ResidualMatrix_1.23.0.tgz(r-4.5-any)
ResidualMatrix_1.23.0.tar.gz(r-4.7-any)ResidualMatrix_1.23.0.tar.gz(r-4.6-any)
ResidualMatrix_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ResidualMatrix/json (API)
| # Install 'ResidualMatrix' in R: |
| install.packages('ResidualMatrix', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ltla/residualmatrix/issues
On BioConductor:ResidualMatrix-1.23.0(bioc 3.24)ResidualMatrix-1.22.0(bioc 3.23)
softwaredatarepresentationregressionbatcheffectexperimentaldesign
Last updated from:1999e8c5bd. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 146 | ||
| linux-devel-x86_64 | NOTE | 348 | ||
| source / vignettes | OK | 236 | ||
| linux-release-x86_64 | NOTE | 313 | ||
| macos-release-arm64 | NOTE | 216 | ||
| macos-oldrel-arm64 | NOTE | 143 | ||
| windows-devel | NOTE | 222 | ||
| windows-release | NOTE | 207 | ||
| windows-oldrel | NOTE | 235 | ||
| wasm-release | OK | 135 |
Exports:colMeanscolSumsDelayedArrayextract_arrayResidualMatrixResidualMatrixSeedrowMeansrowSumsshowt
Dependencies:abindBiocGenericsDelayedArraygenericsIRangeslatticeMatrixMatrixGenericsmatrixStatsS4ArraysS4VectorsSparseArrayXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The 'ResidualMatrix' package | ResidualMatrix-package |
| The ResidualMatrix class | %*%,ANY,ResidualMatrix-method %*%,ResidualMatrix,ANY-method %*%,ResidualMatrix,ResidualMatrix-method colMeans,ResidualMatrix-method colSums,ResidualMatrix-method crossprod,ANY,ResidualMatrix-method crossprod,ResidualMatrix,ANY-method crossprod,ResidualMatrix,missing-method crossprod,ResidualMatrix,ResidualMatrix-method dimnames<-,ResidualMatrix,ANY-method ResidualMatrix ResidualMatrix-class rowMeans,ResidualMatrix-method rowSums,ResidualMatrix-method t,ResidualMatrix-method tcrossprod,ANY,ResidualMatrix-method tcrossprod,ResidualMatrix,ANY-method tcrossprod,ResidualMatrix,missing-method tcrossprod,ResidualMatrix,ResidualMatrix-method [,ResidualMatrix,ANY,ANY,ANY-method |
| The ResidualMatrixSeed class | DelayedArray,ResidualMatrixSeed-method dim,ResidualMatrixSeed-method dimnames,ResidualMatrixSeed-method extract_array,ResidualMatrixSeed-method ResidualMatrixSeed ResidualMatrixSeed-class show,ResidualMatrixSeed-method |
