Package: ResidualMatrix 1.15.1

Aaron Lun

ResidualMatrix: Creating a DelayedMatrix of Regression Residuals

Provides delayed computation of a matrix of residuals after fitting a linear model to each column of an input matrix. Also supports partial computation of residuals where selected factors are to be preserved in the output matrix. Implements a number of efficient methods for operating on the delayed matrix of residuals, most notably matrix multiplication and calculation of row/column sums or means.

Authors:Aaron Lun [aut, cre, cph]

ResidualMatrix_1.15.1.tar.gz
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ResidualMatrix.pdf |ResidualMatrix.html✨
ResidualMatrix/json (API)
NEWS

# Install 'ResidualMatrix' in R:
install.packages('ResidualMatrix', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ltla/residualmatrix/issues

On BioConductor:ResidualMatrix-1.15.0(bioc 3.20)ResidualMatrix-1.14.0(bioc 3.19)

bioconductor-package

10 exports 2.05 score 14 dependencies 7 dependents

Last updated 19 days agofrom:dd8b863c91

Exports:colMeanscolSumsDelayedArrayextract_arrayResidualMatrixResidualMatrixSeedrowMeansrowSumsshowt

Dependencies:abindBiocGenericscrayonDelayedArrayIRangeslatticeMatrixMatrixGenericsmatrixStatsS4ArraysS4VectorsSparseArrayXVectorzlibbioc

Using the ResidualMatrix class

Aaron Lun

Rendered fromResidualMatrix.Rmdusingknitr::rmarkdownon Jun 23 2024.

Last update: 2024-06-21
Started: 2020-08-31

Readme and manuals

Help Manual

Help pageTopics
The 'ResidualMatrix' packageResidualMatrix-package
The ResidualMatrix class%*%,ANY,ResidualMatrix-method %*%,ResidualMatrix,ANY-method %*%,ResidualMatrix,ResidualMatrix-method colMeans,ResidualMatrix-method colSums,ResidualMatrix-method crossprod,ANY,ResidualMatrix-method crossprod,ResidualMatrix,ANY-method crossprod,ResidualMatrix,missing-method crossprod,ResidualMatrix,ResidualMatrix-method dimnames<-,ResidualMatrix,ANY-method ResidualMatrix ResidualMatrix-class rowMeans,ResidualMatrix-method rowSums,ResidualMatrix-method t,ResidualMatrix-method tcrossprod,ANY,ResidualMatrix-method tcrossprod,ResidualMatrix,ANY-method tcrossprod,ResidualMatrix,missing-method tcrossprod,ResidualMatrix,ResidualMatrix-method [,ResidualMatrix,ANY,ANY,ANY-method
The ResidualMatrixSeed classDelayedArray,ResidualMatrixSeed-method dim,ResidualMatrixSeed-method dimnames,ResidualMatrixSeed-method extract_array,ResidualMatrixSeed-method ResidualMatrixSeed ResidualMatrixSeed-class show,ResidualMatrixSeed-method