Package: ResidualMatrix 1.23.0

Aaron Lun

ResidualMatrix: Creating a DelayedMatrix of Regression Residuals

Provides delayed computation of a matrix of residuals after fitting a linear model to each column of an input matrix. Also supports partial computation of residuals where selected factors are to be preserved in the output matrix. Implements a number of efficient methods for operating on the delayed matrix of residuals, most notably matrix multiplication and calculation of row/column sums or means.

Authors:Aaron Lun [aut, cre, cph]

ResidualMatrix_1.23.0.tar.gz
ResidualMatrix_1.23.0.zip(r-4.7)ResidualMatrix_1.23.0.zip(r-4.6)ResidualMatrix_1.23.0.zip(r-4.5)
ResidualMatrix_1.23.0.tgz(r-4.6-any)ResidualMatrix_1.23.0.tgz(r-4.5-any)
ResidualMatrix_1.23.0.tar.gz(r-4.7-any)ResidualMatrix_1.23.0.tar.gz(r-4.6-any)
ResidualMatrix_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ResidualMatrix/json (API)
NEWS

# Install 'ResidualMatrix' in R:
install.packages('ResidualMatrix', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ltla/residualmatrix/issues

On BioConductor:ResidualMatrix-1.23.0(bioc 3.24)ResidualMatrix-1.22.0(bioc 3.23)

softwaredatarepresentationregressionbatcheffectexperimentaldesign

6.69 score 1 stars 11 packages 11 scripts 6.8k downloads 10 exports 13 dependencies

Last updated from:1999e8c5bd. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING146
linux-devel-x86_64NOTE348
source / vignettesOK236
linux-release-x86_64NOTE313
macos-release-arm64NOTE216
macos-oldrel-arm64NOTE143
windows-develNOTE222
windows-releaseNOTE207
windows-oldrelNOTE235
wasm-releaseOK135

Exports:colMeanscolSumsDelayedArrayextract_arrayResidualMatrixResidualMatrixSeedrowMeansrowSumsshowt

Dependencies:abindBiocGenericsDelayedArraygenericsIRangeslatticeMatrixMatrixGenericsmatrixStatsS4ArraysS4VectorsSparseArrayXVector

Using the ResidualMatrix class

Aaron Lun

Rendered fromResidualMatrix.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2024-06-21
Started: 2020-08-31

Readme and manuals

Help Manual

Help pageTopics
The 'ResidualMatrix' packageResidualMatrix-package
The ResidualMatrix class%*%,ANY,ResidualMatrix-method %*%,ResidualMatrix,ANY-method %*%,ResidualMatrix,ResidualMatrix-method colMeans,ResidualMatrix-method colSums,ResidualMatrix-method crossprod,ANY,ResidualMatrix-method crossprod,ResidualMatrix,ANY-method crossprod,ResidualMatrix,missing-method crossprod,ResidualMatrix,ResidualMatrix-method dimnames<-,ResidualMatrix,ANY-method ResidualMatrix ResidualMatrix-class rowMeans,ResidualMatrix-method rowSums,ResidualMatrix-method t,ResidualMatrix-method tcrossprod,ANY,ResidualMatrix-method tcrossprod,ResidualMatrix,ANY-method tcrossprod,ResidualMatrix,missing-method tcrossprod,ResidualMatrix,ResidualMatrix-method [,ResidualMatrix,ANY,ANY,ANY-method
The ResidualMatrixSeed classDelayedArray,ResidualMatrixSeed-method dim,ResidualMatrixSeed-method dimnames,ResidualMatrixSeed-method extract_array,ResidualMatrixSeed-method ResidualMatrixSeed ResidualMatrixSeed-class show,ResidualMatrixSeed-method