Package: RPA 1.69.0
Leo Lahti
RPA: RPA: Robust Probabilistic Averaging for probe-level analysis
Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.
Authors:
RPA_1.69.0.tar.gz
RPA_1.69.0.zip(r-4.7)RPA_1.69.0.zip(r-4.6)RPA_1.69.0.zip(r-4.5)
RPA_1.69.0.tgz(r-4.6-any)RPA_1.69.0.tgz(r-4.5-any)
RPA_1.69.0.tar.gz(r-4.7-any)RPA_1.69.0.tar.gz(r-4.6-any)
RPA_1.69.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
RPA/json (API)
NEWS
| # Install 'RPA' in R: |
| install.packages('RPA', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:RPA-1.69.0(bioc 3.24)RPA-1.68.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
geneexpressionmicroarraypreprocessingqualitycontrol
Last updated from:173cf6b19a. Checks:1 ERROR, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 156 | ||
| linux-devel-x86_64 | OK | 258 | ||
| source / vignettes | OK | 223 | ||
| linux-release-x86_64 | OK | 247 | ||
| macos-release-arm64 | OK | 128 | ||
| macos-oldrel-arm64 | OK | 132 | ||
| windows-devel | OK | 179 | ||
| windows-release | OK | 171 | ||
| windows-oldrel | OK | 165 | ||
| wasm-release | OK | 127 |
Exports:calculate.rpacollect.hyperparametersd.update.fastestimate.affinitiesestimate.hyperparametersfrpaget.probe.matrixget.probe.parametersget.probesethyperparameter.updaten.phylotypes.per.oligoonline.quantileprobe.parameters.tolistprobe.performanceprobeplotprobetablerparpa.completerpa.fitRPA.iterationrpa.onlinerpa.plotRPA.preprocessrpa.summarizerpaplotsample.probesetsummarize_probedatasummarize.batchsummarize.batchessummarize.rpasummarize.sumupdating.hyperparameters
Dependencies:ade4affyaffyioapebase64encBiobaseBiocGenericsBiocManagerBiocStylebiomformatBiostringsbookdownbslibcachemcliclustercodetoolscpp11crayondata.tabledigestevaluatefarverfastmapfontawesomeforeachfsgenericsggplot2gluegtablehighrhtmltoolsigraphIRangesisobanditeratorsjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemulttestnlmepermutephyloseqpixmappkgconfigplyrpreprocessCoreR6rappdirsRColorBrewerRcppRcppArmadilloreshape2rlangrmarkdownS4VectorsS7sassscalesSeqinfospstringistringrsurvivaltinytexvctrsveganviridisLitewithrxfunXVectoryaml
