Package: RPA 1.63.0
Leo Lahti
RPA: RPA: Robust Probabilistic Averaging for probe-level analysis
Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.
Authors:
RPA_1.63.0.tar.gz
RPA_1.63.0.zip(r-4.5)RPA_1.63.0.zip(r-4.4)RPA_1.63.0.zip(r-4.3)
RPA_1.63.0.tgz(r-4.4-any)RPA_1.63.0.tgz(r-4.3-any)
RPA_1.63.0.tar.gz(r-4.5-noble)RPA_1.63.0.tar.gz(r-4.4-noble)
RPA_1.63.0.tgz(r-4.4-emscripten)RPA_1.63.0.tgz(r-4.3-emscripten)
RPA.pdf |RPA.html✨
RPA/json (API)
NEWS
| # Install 'RPA' in R: |
| install.packages('RPA', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:RPA-1.63.0(bioc 3.21)RPA-1.62.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
geneexpressionmicroarraypreprocessingqualitycontrol
Last updated 2 months agofrom:b60801586d. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 30 2024 |
| R-4.5-win | OK | Nov 30 2024 |
| R-4.5-linux | OK | Nov 30 2024 |
| R-4.4-win | OK | Nov 30 2024 |
| R-4.4-mac | OK | Nov 30 2024 |
| R-4.3-win | OK | Nov 30 2024 |
| R-4.3-mac | OK | Nov 30 2024 |
Exports:calculate.rpacollect.hyperparametersd.update.fastestimate.affinitiesestimate.hyperparametersfrpaget.probe.matrixget.probe.parametersget.probesethyperparameter.updaten.phylotypes.per.oligoonline.quantileprobe.parameters.tolistprobe.performanceprobeplotprobetablerparpa.completerpa.fitRPA.iterationrpa.onlinerpa.plotRPA.preprocessrpa.summarizerpaplotsample.probesetsummarize_probedatasummarize.batchsummarize.batchessummarize.rpasummarize.sumupdating.hyperparameters
Dependencies:ade4affyaffyioapeaskpassbase64encBiobaseBiocGenericsBiocManagerBiocStylebiomformatBiostringsbookdownbslibcachemcliclustercodetoolscolorspacecpp11crayoncurldata.tabledigestevaluatefansifarverfastmapfontawesomeforeachfsgenericsGenomeInfoDbGenomeInfoDbDataggplot2gluegtablehighrhtmltoolshttrigraphIRangesisobanditeratorsjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemulttestmunsellnlmeopensslpermutephyloseqpillarpixmappkgconfigplyrpreprocessCoreR6rappdirsRColorBrewerRcppRcppArmadilloreshape2rhdf5rhdf5filtersRhdf5librlangrmarkdownS4VectorssassscalesspstringistringrsurvivalsystibbletinytexUCSC.utilsutf8vctrsveganviridisLitewithrxfunXVectoryamlzlibbioc
