Package: PWMEnrich.Mmusculus.background 4.47.0

Diego Diez

PWMEnrich.Mmusculus.background: M. musculus background for PWMEnrich

PWMEnrich pre-compiled background objects for M.musculus (mouse) and MotifDb M. musculus motifs.

Authors:Robert Stojnic

PWMEnrich.Mmusculus.background_4.47.0.tar.gz
PWMEnrich.Mmusculus.background_4.47.0.tar.gz(r-4.7-any)PWMEnrich.Mmusculus.background_4.47.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PWMEnrich.Mmusculus.background/json (API)

# Install 'PWMEnrich.Mmusculus.background' in R:
install.packages('PWMEnrich.Mmusculus.background', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:PWMEnrich.Mmusculus.background-4.47.0(data/experiment 3.24)PWMEnrich.Mmusculus.background-4.46.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

mus_musculus_datadatapkg

2.30 score 4 scripts 0 exports 13 dependencies

Last updated from:649b8b3bb8. Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR124
linux-develNOTE170
source / vignettesOK202
linux-releaseNOTE167

Exports:

Dependencies:BiocGenericsBiostringscrayonevdgdatagenericsgtoolsIRangesPWMEnrichS4VectorsSeqinfoseqLogoXVector

Readme and manuals

Help Manual

Help pageTopics
PWMEnrich.Mmusculus.background package overviewPWMEnrich.Mmusculus.background-package mm9.upstream2000 MotifDb.Mmus MotifDb.Mmus.PFM PWMCutoff4.mm9.MotifDb.Mmus PWMCutoff5.mm9.MotifDb.Mmus PWMEnrich.Mmusculus.background PWMGEV.mm9.MotifDb.Mmus PWMLogn.mm9.MotifDb.Mmus PWMPvalueCutoff1e2.mm9.MotifDb.Mmus PWMPvalueCutoff1e3.mm9.MotifDb.Mmus PWMPvalueCutoff1e4.mm9.MotifDb.Mmus