Package: Omixer 1.23.0

Lucy Sinke

Omixer: Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies

Omixer - an Bioconductor package for multivariate and reproducible sample randomization, which ensures optimal sample distribution across batches with well-documented methods. It outputs lab-friendly sample layouts, reducing the risk of sample mixups when manually pipetting randomized samples.

Authors:Lucy Sinke [cre, aut]

Omixer_1.23.0.tar.gz
Omixer_1.23.0.zip(r-4.7)Omixer_1.23.0.zip(r-4.6)Omixer_1.23.0.zip(r-4.5)
Omixer_1.23.0.tgz(r-4.6-any)Omixer_1.23.0.tgz(r-4.5-any)
Omixer_1.23.0.tar.gz(r-4.7-any)Omixer_1.23.0.tar.gz(r-4.6-any)
Omixer_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Omixer/json (API)
NEWS

# Install 'Omixer' in R:
install.packages('Omixer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:Omixer-1.23.0(bioc 3.24)Omixer-1.22.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

datarepresentationexperimentaldesignqualitycontrolsoftwarevisualization

4.00 score 2 scripts 355 downloads 4 exports 39 dependencies

Last updated from:d1f35a987a. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING154
linux-devel-x86_64NOTE201
source / vignettesOK223
linux-release-x86_64NOTE172
macos-release-arm64NOTE110
macos-oldrel-arm64NOTE93
windows-develNOTE89
windows-releaseNOTE104
windows-oldrelNOTE97
wasm-releaseOK121

Exports:omixerCorromixerRandomixerSheetomixerSpecific

Dependencies:bitbit64clicliprcpp11crayondplyrfarverforcatsgenericsggplot2gluegridExtragtablehmsisobandlabelinglifecyclemagrittrpillarpkgconfigprettyunitsprogressR6RColorBrewerreadrrlangS7scalesstringistringrtibbletidyselecttzdbutf8vctrsviridisLitevroomwithr

Omixer: multivariate and reproducible randomization to proactively counter batch effects in omics studies

Lucy Sinke, Davy Cats, Bas Heijmans

Rendered fromomixer-vignette.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2021-08-16
Started: 2020-06-02