Package: Omixer 1.15.0

Lucy Sinke

Omixer: Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies

Omixer - an Bioconductor package for multivariate and reproducible sample randomization, which ensures optimal sample distribution across batches with well-documented methods. It outputs lab-friendly sample layouts, reducing the risk of sample mixups when manually pipetting randomized samples.

Authors:Lucy Sinke [cre, aut]

Omixer_1.15.0.tar.gz
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Omixer.pdf |Omixer.html
Omixer/json (API)
NEWS

# Install 'Omixer' in R:
install.packages('Omixer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/molepi/omixer/issues

On BioConductor:Omixer-1.15.0(bioc 3.20)Omixer-1.14.0(bioc 3.19)

bioconductor-package

4 exports 0.49 score 46 dependencies

Last updated 2 months agofrom:2880530c98

Exports:omixerCorromixerRandomixerSheetomixerSpecific

Dependencies:bitbit64clicliprcolorspacecpp11crayondplyrfansifarverforcatsgenericsggplot2gluegridExtragtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigprettyunitsprogressR6RColorBrewerreadrrlangscalesstringistringrtibbletidyselecttzdbutf8vctrsviridisLitevroomwithr

Omixer: multivariate and reproducible randomization to proactively counter batch effects in omics studies

Rendered fromomixer-vignette.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2021-08-16
Started: 2020-06-02