Package: Nebulosa 1.15.0

Jose Alquicira-Hernandez

Nebulosa: Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation

This package provides a enhanced visualization of single-cell data based on gene-weighted density estimation. Nebulosa recovers the signal from dropped-out features and allows the inspection of the joint expression from multiple features (e.g. genes). Seurat and SingleCellExperiment objects can be used within Nebulosa.

Authors:Jose Alquicira-Hernandez [aut, cre]

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Bug tracker:https://github.com/powellgenomicslab/nebulosa/issues

On BioConductor:Nebulosa-1.15.0(bioc 3.20)Nebulosa-1.14.0(bioc 3.19)

bioconductor-package

1 exports 0.91 score 88 dependencies 3 mentions

Last updated 2 months agofrom:4e6afd0abb

Exports:plot_density

Dependencies:abindaskpassbeeswarmBiobaseBiocGenericsCairoclicodetoolscolorspacecpp11crayoncurlDelayedArraydigestdotCall64fansifarverFNNfuturefuture.applygenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggbeeswarmggplot2ggrastrglobalsgluegtablehttrIRangesisobandjsonlitekernlabKernSmoothkslabelinglatticelifecyclelistenvmagrittrMASSMatrixMatrixGenericsmatrixStatsmclustmgcvmimemulticoolmunsellmvtnormnlmeopensslparallellypatchworkpillarpkgconfigpngpracmaprogressrR6raggRColorBrewerRcppRcppEigenrlangS4ArraysS4VectorsscalesSeuratObjectSingleCellExperimentspspamSparseArraySummarizedExperimentsyssystemfontstextshapingtibbleUCSC.utilsutf8vctrsviporviridisLitewithrXVectorzlibbioc