Package: MouseFM 1.15.0

Matthias Munz

MouseFM: In-silico methods for genetic finemapping in inbred mice

This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).

Authors:Matthias Munz [aut, cre], Inken Wohlers [aut], Hauke Busch [aut]

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MouseFM.pdf |MouseFM.html✨
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Bug tracker:https://github.com/matmu/mousefm/issues

On BioConductor:MouseFM-1.15.0(bioc 3.20)MouseFM-1.14.0(bioc 3.19)

bioconductor-package

15 exports 0.61 score 86 dependencies 1 mentions

Last updated 2 months agofrom:120d04a635

Exports:annotate_consequencesannotate_mouse_genesavail_chromosomesavail_consequencesavail_strainsdf2GRangesfetchfinemapget_topgetURLGRanges2dfprioref_genomesetURLvis_reduction_factors

Dependencies:AnnotationDbiaskpassBiobaseBiocFileCacheBiocGenericsbiomaRtBiostringsbitbit64blobcachemclicolorspacecpp11crayoncurldata.tableDBIdbplyrdigestdplyrfansifarverfastmapfilelockgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablegtoolshmshttrhttr2IRangesisobandjsonliteKEGGRESTlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplogrplyrpngprettyunitsprogresspurrrR6rappdirsRColorBrewerRcppreshape2rlangrlistRSQLiteS4VectorsscalesstringistringrsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrXMLxml2XVectoryamlzlibbioc