Package: MiRaGE 1.49.0

Y-h. Taguchi

MiRaGE: MiRNA Ranking by Gene Expression

The package contains functions for inferece of target gene regulation by miRNA, based on only target gene expression profile.

Authors:Y-h. Taguchi <[email protected]>

MiRaGE_1.49.0.tar.gz
MiRaGE_1.49.0.zip(r-4.5)MiRaGE_1.49.0.zip(r-4.4)MiRaGE_1.49.0.zip(r-4.3)
MiRaGE_1.49.0.tgz(r-4.4-any)MiRaGE_1.49.0.tgz(r-4.3-any)
MiRaGE_1.49.0.tar.gz(r-4.5-noble)MiRaGE_1.49.0.tar.gz(r-4.4-noble)
MiRaGE_1.49.0.tgz(r-4.4-emscripten)MiRaGE_1.49.0.tgz(r-4.3-emscripten)
MiRaGE.pdf |MiRaGE.html
MiRaGE/json (API)

# Install 'MiRaGE' in R:
install.packages('MiRaGE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • gene_exp - This ExpressionSet represents gene expression of lung cancer cell line one day after let-7a transfection.

On BioConductor:MiRaGE-1.47.0(bioc 3.20)MiRaGE-1.46.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologymicroarraygeneexpressionrnaseqsequencingsage

3.85 score 35 scripts 237 downloads 1 mentions 7 exports 39 dependencies

Last updated 23 days agofrom:99be42db0b. Checks:OK: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 30 2024
R-4.5-winWARNINGOct 31 2024
R-4.5-linuxWARNINGOct 30 2024
R-4.4-winWARNINGOct 31 2024
R-4.4-macWARNINGOct 31 2024
R-4.3-winWARNINGOct 31 2024
R-4.3-macWARNINGOct 31 2024

Exports:getMiRaGEDataHS_conv_idid_conv_genMiRaGEMM_conv_idTBL2_HS_genTBL2_MM_gen

Dependencies:AnnotationDbiaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapGenomeInfoDbGenomeInfoDbDatagluehttrIRangesjsonliteKEGGRESTlifecyclememoisemimeopensslpkgconfigplogrpngR6rlangRSQLiteS4VectorssysUCSC.utilsvctrsXVectorzlibbioc

How to use MiRaGE Package

Rendered fromMiRaGE.Rnwusingutils::Sweaveon Oct 30 2024.

Last update: 2013-12-10
Started: 2013-11-01