Package: MetaCyto 1.27.0

Zicheng Hu

MetaCyto: MetaCyto: A package for meta-analysis of cytometry data

This package provides functions for preprocessing, automated gating and meta-analysis of cytometry data. It also provides functions that facilitate the collection of cytometry data from the ImmPort database.

Authors:Zicheng Hu, Chethan Jujjavarapu, Sanchita Bhattacharya, Atul J. Butte

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Peer review:

On BioConductor:MetaCyto-1.27.0(bioc 3.20)MetaCyto-1.26.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

23 exports 0.91 score 108 dependencies 3 mentions

Last updated 2 months agofrom:fc2aedcffe

Exports:autoCluster.batchclusterStatscollectDatadensityPlotfcsInfoParserfilterLabelsfindCutoffflowHCflowSOM.MCglmAnalysislabelClusterlabelSummarymarkerFindermetaAnalysisnameUpdatorpanelSummaryplotGApreprocessingpreprocessing.batchsampleInfoParsersearchClustersearchCluster.batchset2Frame

Dependencies:abindALLbackportsBHBiobaseBiocGenericsbootbriobroomcallrcarcarDatacliclustercolorRampscolorspaceConsensusClusterPluscorrplotcowplotcpp11crayoncytolibdescdiffobjdigestdplyrevaluatefansifarverfastclusterflowCoreFlowSOMfsgenericsggforceggnewscaleggplot2ggpubrggrepelggsciggsignifgluegridExtragtableigraphisobandjsonlitelabelinglatticelifecyclelme4magrittrMASSmathjaxrMatrixMatrixModelsmatrixStatsmetadatmetaformgcvminqamunsellnlmenloptrnnetnumDerivpbapplypbkrtestpillarpkgbuildpkgconfigpkgloadpolyclippolynompraiseprocessxpspurrrquantregR6RColorBrewerRcppRcppEigenrematch2Rhdf5librlangrprojrootRProtoBufLibrstatixRtsneS4VectorsscalesSparseMstringistringrsurvivalsystemfontstestthattibbletidyrtidyselecttweenrutf8vctrsviridisLitewaldowithrXML