Package: MPFE 1.41.0
Conrad Burden
MPFE: Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data
Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.
Authors:
MPFE_1.41.0.tar.gz
MPFE_1.41.0.zip(r-4.5)MPFE_1.41.0.zip(r-4.4)MPFE_1.41.0.zip(r-4.3)
MPFE_1.41.0.tgz(r-4.4-any)MPFE_1.41.0.tgz(r-4.3-any)
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MPFE.pdf |MPFE.html✨
MPFE/json (API)
| # Install 'MPFE' in R: |
| install.packages('MPFE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- patternsExample - PatternsExample
On BioConductor:MPFE-1.41.0(bioc 3.20)MPFE-1.40.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:f7304976cc
Exports:estimatePatternspatternMapplotPatterns
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| MPFE | MPFE-package MPFE |
| Estimate distribution of methylation patterns | estimatePatterns |
| Plot a representation of the patterns and their frequencies | patternMap |
| patternsExample | patternsExample |
| Plot methylation pattern distribution | plotPatterns |
