Package: MBCB 1.67.0

Bo Yao

MBCB: MBCB (Model-based Background Correction for Beadarray)

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Authors:Yang Xie <[email protected]>

MBCB_1.67.0.tar.gz
MBCB_1.67.0.zip(r-4.7-any)MBCB_1.67.0.zip(r-4.6-any)MBCB_1.67.0.zip(r-4.5-any)
MBCB_1.67.0.tgz(r-4.6-any)MBCB_1.67.0.tgz(r-4.5-any)
MBCB_1.67.0.tar.gz(r-4.7-any)MBCB_1.67.0.tar.gz(r-4.6-any)
MBCB_1.67.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
MBCB/json (API)

# Install 'MBCB' in R:

install.packages('MBCB', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

expressionSignal - MBCB - Bayesian Background Correction for Illumina Beadarray
negativeControl - MBCB - Bayesian Background Correction for Illumina Beadarray

On BioConductor:MBCB-1.67.0(bioc 3.24)MBCB-1.66.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarray preprocessing

3.81 score 16 scripts 554 downloads 2 mentions 6 exports 2 dependencies

Last updated from:e4027a7946. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	ERROR	132
linux-devel	NOTE	198
source / vignettes	OK	183
linux-release	NOTE	149
macos-release	NOTE	148
macos-oldrel	NOTE	92
windows-devel	NOTE	70
windows-release	NOTE	66
windows-oldrel	NOTE	76
wasm-release	OK	103

Exports:bg.mcmc bg.rma mbcb.correct mbcb.gui mbcb.main mbcb.parseFile

Dependencies:preprocessCore tcltk2

MBCB

Rendered fromMBCB.Rnwusingutils::Sweave

Last update: 2013-11-01
Started: 2013-11-01

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
MBCB - Bayesian Background Correction for Illumina Beadarray	bg.mcmc
MBCB - Robust Multi-Array Average Background Correction for Illumina Beadarray	bg.rma
MBCB - Model-Based Background Correction for Illumina Beadarray	mbcb.correct
MBCB - Model-Based Background Correction for Illumina Beadarray	mbcb.gui
MBCB - Model-Based Background Correction for Illumina Beadarray	mbcb.main
MBCB - Model-Based Background Correction for Illumina Beadarray	mbcb.parseFile
MBCB - Bayesian Background Correction for Illumina Beadarray	expressionSignal MBCBExpressionData negativeControl
MBCB - Model-Based Background Correction for Illumina Beadarray	printMBCBOutput