Package: MACSQuantifyR 1.27.0

Raphaël Bonnet

MACSQuantifyR: Fast treatment of MACSQuantify FACS data

Automatically process the metadata of MACSQuantify FACS sorter. It runs multiple modules: i) imports of raw file and graphical selection of duplicates in well plate, ii) computes statistics on data and iii) can compute combination index.

Authors:Raphaël Bonnet [aut, cre], Marielle Nebout [dtc],Giulia Biondani [dtc], Jean-François Peyron[aut,ths], Inserm [fnd]

MACSQuantifyR_1.27.0.tar.gz
MACSQuantifyR_1.27.0.zip(r-4.7)MACSQuantifyR_1.27.0.zip(r-4.6)MACSQuantifyR_1.27.0.zip(r-4.5)
MACSQuantifyR_1.27.0.tgz(r-4.6-any)MACSQuantifyR_1.27.0.tgz(r-4.5-any)
MACSQuantifyR_1.27.0.tar.gz(r-4.7-any)MACSQuantifyR_1.27.0.tar.gz(r-4.6-any)
MACSQuantifyR_1.27.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MACSQuantifyR/json (API)
NEWS

# Install 'MACSQuantifyR' in R:
install.packages('MACSQuantifyR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:MACSQuantifyR-1.27.0(bioc 3.24)MACSQuantifyR-1.26.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

dataimportpreprocessingnormalizationflowcytometrydatarepresentationgui

4.48 score 10 scripts 325 downloads 10 exports 72 dependencies

Last updated from:e19a424ec9. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR172
linux-devel-x86_64NOTE194
source / vignettesOK193
linux-release-x86_64NOTE214
macos-release-arm64NOTE133
macos-oldrel-arm64NOTE89
windows-develNOTE98
windows-releaseNOTE103
windows-oldrelNOTE102
wasm-releaseOK135

Exports:barplot_datacombination_indexgenerate_reportload_MACSQuantnew_class_MQon_plate_selectionpipelinerDatasetPathsorted

Dependencies:askpassbase64encbslibcachemcellrangerclicpp11crayoncurldeldirdigestevaluatefarverfastmapfontawesomefsggplot2ggrepelgluegridExtragtablehighrhmshtmltoolshttrinterpisobandjpegjquerylibjsonliteknitrlabelinglatticelatticeExtralifecyclemagrittrMASSmemoisemimeopensslpillarpkgconfigpngprettydocprettyunitsprogressR6rappdirsRColorBrewerRcppRcppEigenreadxlrematchrlangrmarkdownrvestS7sassscalesselectrstringistringrsystibbletinytexutf8vctrsviridisLitewithrxfunxml2yaml

MACSQuantifyR - Introduction

Raphaël Bonnet, Jean-François Peyron

Rendered fromMACSQuantifyR.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2019-10-08
Started: 2018-11-17

MACSQuantifyR - Automatic pipeline

Raphaël Bonnet, Jean-François Peyron

Rendered fromMACSQuantifyR_pipeline.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2019-10-08
Started: 2019-10-08

MACSQuantifyR - Step-by-step analysis

Raphaël Bonnet, Jean-François Peyron

Rendered fromMACSQuantifyR_combo.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2019-10-22
Started: 2019-10-08