Package: LungCancerACvsSCCGEO 1.49.0
Adi Laurentiu Tarca
LungCancerACvsSCCGEO: A lung cancer dataset that can be used with maPredictDSC package for developing outcome prediction models from Affymetrix CEL files.
This package contains 30 Affymetrix CEL files for 7 Adenocarcinoma (AC) and 8 Squamous cell carcinoma (SCC) lung cancer samples taken at random from 3 GEO datasets (GSE10245, GSE18842 and GSE2109) and other 15 samples from a dataset produced by the organizers of the IMPROVER Diagnostic Signature Challenge available from GEO (GSE43580).
Authors:
LungCancerACvsSCCGEO_1.49.0.tar.gz
LungCancerACvsSCCGEO_1.49.0.tar.gz(r-4.7-any)LungCancerACvsSCCGEO_1.49.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
LungCancerACvsSCCGEO/json (API)
| # Install 'LungCancerACvsSCCGEO' in R: |
| install.packages('LungCancerACvsSCCGEO', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:LungCancerACvsSCCGEO-1.49.0(data/experiment 3.24)LungCancerACvsSCCGEO-1.48.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
cancerdatalungcancerdatamicroarraydatageodatapkg
Last updated from:9261fef5f0. Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 141 | ||
| linux-devel | NOTE | 332 | ||
| source / vignettes | OK | 461 | ||
| linux-release | NOTE | 348 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Annotation of a small set of training and test set samples (30 total) used by team 221 in the IMPROVER DSC for the lung cancer sub-challenge. | anoLC gsLC LungCancerACvsSCCGEO |