Package: ListerEtAlBSseq 1.45.1

Mattia Furlan

ListerEtAlBSseq: BS-seq data of H1 and IMR90 cell line excerpted from Lister et al. 2009

Base resolution bisulfite sequencing data of Human DNA methylomes

Authors:Mattia Pelizzola [aut], Kamal Kishore [aut], Mattia Furlan [ctb, cre]

ListerEtAlBSseq_1.45.1.tar.gz
ListerEtAlBSseq_1.45.1.tar.gz(r-4.7-any)ListerEtAlBSseq_1.45.1.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ListerEtAlBSseq/json (API)

# Install 'ListerEtAlBSseq' in R:
install.packages('ListerEtAlBSseq', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:ListerEtAlBSseq-1.45.1(data/experiment 3.24)ListerEtAlBSseq-1.44.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

experimentdatahomo_sapiens_datasequencingdatadatapkg

2.48 score 0 exports 151 dependencies

Last updated from:30bf58201e. Checks:1 ERROR, 2 WARNING, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR254
linux-develWARNING477
source / vignettesOK809
linux-releaseWARNING517

Exports:

Dependencies:abindAnnotationDbiAnnotationFilteraskpassbackportsbase64encBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocIOBiocParallelbiomaRtBiostringsbiovizBasebitbit64bitopsblobBSgenomebslibcachemcaToolscheckmatecigarillocliclustercodetoolscolorspacecpp11crayoncurldata.tableDBIdbplyrDelayedArraydeldirdichromatdigestdplyrensembldbevaluatefarverfastmapfilelockfontawesomeforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesggplot2gluegplotsgridExtragtablegtoolsGvizhighrHmischmshtmlTablehtmltoolshtmlwidgetshttrhttr2interpIRangesisobandjpegjquerylibjsonliteKEGGRESTKernSmoothknitrlabelinglambda.rlatticelatticeExtralazyevallifecyclelimmamagrittrmarrayMASSMatrixMatrixGenericsmatrixStatsmemoisemethylPipemimennetopensslpillarpkgconfigpngprettyunitsprogressProtGenericspurrrR6rappdirsRColorBrewerRcppRcppEigenRCurlrestfulrRhtslibrjsonrlangrmarkdownrpartRsamtoolsRSQLiterstudioapirtracklayerS4ArraysS4VectorsS7sassscalesSeqinfosnowSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8VariantAnnotationvctrsviridisLitewithrxfunXMLxml2XVectoryaml