Package: KOdata 1.39.0
Shana White
KOdata: LINCS Knock-Out Data Package
Contains consensus genomic signatures (CGS) for experimental cell-line specific gene knock-outs as well as baseline gene expression data for a subset of experimental cell-lines. Intended for use with package KEGGlincs.
Authors:
KOdata_1.39.0.tar.gz
KOdata_1.39.0.tar.gz(r-4.7-any)KOdata_1.39.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
KOdata/json (API)
| # Install 'KOdata' in R: |
| install.packages('KOdata', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- gene_cell_info - Baseline expression information for genes across cell lines
- KO_data - LINCS knock-out data
On BioConductor:KOdata-1.39.0(data/experiment 3.24)KOdata-1.38.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
expressiondatacancerdatahomo_sapiens_datadatapkg
Last updated from:2a207af4d4. Checks:1 ERROR, 2 WARNING, 1 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 128 | ||
| linux-devel | WARNING | 244 | ||
| source / vignettes | OK | 368 | ||
| linux-release | WARNING | 177 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Baseline expression information for genes across cell lines | gene_cell_info |
| LINCS knock-out data | KO_data |
| KOdata: an R data package designed to be used with KEGGlincs | KOdata-package KOdata |