Package: ImageArray 1.1.7

Artür Manukyan

ImageArray: A framework for on-disk and in-memory image arrays

ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in HDF5, Zarr and life sciences image file formats (OME Bio-Formats).

Authors:Artür Manukyan [aut, cre], Helmholtz Association [fnd]

ImageArray_1.1.7.tar.gz
ImageArray_1.1.7.zip(r-4.7-any)ImageArray_1.1.7.zip(r-4.6-any)ImageArray_1.1.7.zip(r-4.5-any)
ImageArray_1.1.7.tgz(r-4.6-any)ImageArray_1.1.7.tgz(r-4.5-any)
ImageArray_1.1.7.tar.gz(r-4.7-any)ImageArray_1.1.7.tar.gz(r-4.6-any)
ImageArray_1.1.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ImageArray/json (API)

# Install 'ImageArray' in R:

install.packages('ImageArray', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bimsbbioinfo/imagearray/issues

On BioConductor:ImageArray-1.1.7(bioc 3.24)ImageArray-1.0.0(bioc 3.23)

software visualization

7.09 score 6 stars 2 packages 20 scripts 478 downloads 25 exports 75 dependencies

Last updated from:81809f28d0. Checks:6 NOTE, 2 ERROR, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	182
linux-devel	ERROR	433
source / vignettes	OK	271
linux-release	NOTE	513
macos-release	NOTE	327
macos-oldrel	NOTE	397
windows-devel	ERROR	398
windows-release	NOTE	384
windows-oldrel	NOTE	386
wasm-release	OK	131

Exports:affine aperm axes BFArray BFPath createImageArray crop extent flip flop getImageInfo ImageArray modulate negate path path<-realize resolution rotate scale scales<-series translation type writeImageArray

Dependencies:abind askpass base64enc BiocGenerics biocmake bitops bslib cachem cli curl DelayedArray digest dir.expiry EBImage evaluate fastmap fftwtools filelock fontawesome fs generics glue grumpy h5mread HDF5Array highr htmltools htmlwidgets httr2 IRanges jpeg jquerylib jsonlite knitr lattice lifecycle locfit magick magrittr Matrix MatrixGenerics matrixStats memoise mime openssl paws.common paws.storage png R.methodsS3 R.oo R.utils R6 rappdirs Rarr Rcpp RCurl rhdf5 rhdf5filters Rhdf5lib rlang rmarkdown S4Arrays S4Vectors sass SparseArray sys tiff tinytex vctrs withr xfun xml2 XVector yaml ZarrArray

ImageArray

Rendered fromImageArray.Rmdusingknitr::rmarkdown

Last update: 2026-08-07
Started: 2025-11-09

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
BFArray constructor method	axes,BFArray-method axes,BFArraySeed-method BFArray BFArray-methods dim,BFArraySeed-method type,BFArraySeed-method
BFPath constructor method	BFPath path,BFPath-method resolution resolution,BFPath-method series series,BFPath-method
getImageInfo	getImageInfo
ImageArray class	.ImageArray ImageArray-class
ImageArray	createImageArray createImageArray,ImageArray-method ImageArray ImageArray-constructor
Methods for ImageArray	aperm,ImageArray-method as.raster as.raster,ImageArray-method as.raster.ImageArray axes axes,ImageArray-method axes<- axes<-,ImageArray-method crop crop,ImageArray-method dim,ImageArray-method extent extent,ImageArray-method ImageArray-methods length,ImageArray-method meta meta,ImageArray-method modulate modulate,ImageArray-method negate negate,ImageArray-method path path,ImageArray-method path<-,ImageArray-method realize realize,ImageArray-method scales scales,ImageArray-method scales<- scales<-,ImageArray-method type,ImageArray-method [,ImageArray,ANY,ANY,ANY-method [[,ImageArray,numeric-method [[<-,ImageArray,numeric-method
Transformations	affine affine,ImageArray-method flip,ImageArray-method flop,ImageArray-method rotate,ImageArray-method scale scale,ImageArray-method trans translation translation,ImageArray-method
DelayedTransformSeed Methods	dim,DelayedTransformSeed-method dimnames,DelayedTransformSeed-method trans_seed type,DelayedTransformSeed-method
writeImageArray	writeImageArray