Package: ImageArray 1.1.7

Artür Manukyan

ImageArray: A framework for on-disk and in-memory image arrays

ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in HDF5, Zarr and life sciences image file formats (OME Bio-Formats).

Authors:Artür Manukyan [aut, cre], Helmholtz Association [fnd]

ImageArray_1.1.7.tar.gz
ImageArray_1.1.7.zip(r-4.7-any)ImageArray_1.1.7.zip(r-4.6-any)ImageArray_1.1.7.zip(r-4.5-any)
ImageArray_1.1.7.tgz(r-4.6-any)ImageArray_1.1.7.tgz(r-4.5-any)
ImageArray_1.1.7.tar.gz(r-4.7-any)ImageArray_1.1.7.tar.gz(r-4.6-any)
ImageArray_1.1.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ImageArray/json (API)

# Install 'ImageArray' in R:
install.packages('ImageArray', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bimsbbioinfo/imagearray/issues

On BioConductor:ImageArray-1.1.7(bioc 3.24)ImageArray-1.0.0(bioc 3.23)

softwarevisualization

6.07 score 7 stars 2 packages 20 scripts 474 downloads 25 exports 75 dependencies

Last updated from:81809f28d0. Checks:1 NOTE, 3 ERROR, 5 WARNING, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE165
linux-develERROR372
source / vignettesERROR290
linux-releaseWARNING503
macos-releaseWARNING452
macos-oldrelWARNING455
windows-develERROR413
windows-releaseWARNING428
windows-oldrelWARNING408
wasm-releaseOK141

Exports:affineapermaxesBFArrayBFPathcreateImageArraycropextentflipflopgetImageInfoImageArraymodulatenegatepathpath<-realizeresolutionrotatescalescales<-seriestranslationtypewriteImageArray

Dependencies:abindaskpassbase64encBiocGenericsbiocmakebitopsbslibcachemclicurlDelayedArraydigestdir.expiryEBImageevaluatefastmapfftwtoolsfilelockfontawesomefsgenericsgluegrumpyh5mreadHDF5Arrayhighrhtmltoolshtmlwidgetshttr2IRangesjpegjquerylibjsonliteknitrlatticelifecyclelocfitmagickmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpaws.commonpaws.storagepngR.methodsS3R.ooR.utilsR6rappdirsRarrRcppRCurlrhdf5rhdf5filtersRhdf5librlangrmarkdownS4ArraysS4VectorssassSparseArraysystifftinytexvctrswithrxfunxml2XVectoryamlZarrArray

Readme and manuals

Help Manual

Help pageTopics
BFArray constructor methodaxes,BFArray-method axes,BFArraySeed-method BFArray BFArray-methods dim,BFArraySeed-method type,BFArraySeed-method
BFPath constructor methodBFPath path,BFPath-method resolution resolution,BFPath-method series series,BFPath-method
getImageInfogetImageInfo
ImageArray class.ImageArray ImageArray-class
ImageArraycreateImageArray createImageArray,ImageArray-method ImageArray ImageArray-constructor
Methods for ImageArrayaperm,ImageArray-method as.raster as.raster,ImageArray-method as.raster.ImageArray axes axes,ImageArray-method axes<- axes<-,ImageArray-method crop crop,ImageArray-method dim,ImageArray-method extent extent,ImageArray-method ImageArray-methods length,ImageArray-method meta meta,ImageArray-method modulate modulate,ImageArray-method negate negate,ImageArray-method path path,ImageArray-method path<-,ImageArray-method realize realize,ImageArray-method scales scales,ImageArray-method scales<- scales<-,ImageArray-method type,ImageArray-method [,ImageArray,ANY,ANY,ANY-method [[,ImageArray,numeric-method [[<-,ImageArray,numeric-method
Transformationsaffine affine,ImageArray-method flip,ImageArray-method flop,ImageArray-method rotate,ImageArray-method scale scale,ImageArray-method trans translation translation,ImageArray-method
DelayedTransformSeed Methodsdim,DelayedTransformSeed-method dimnames,DelayedTransformSeed-method trans_seed type,DelayedTransformSeed-method
writeImageArraywriteImageArray