Package: ImageArray 1.1.2

Artür Manukyan

ImageArray: A framework for on-disk and in-memory image arrays

ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in HDF5, Zarr and life sciences image file formats (OME Bio-Formats).

Authors:Artür Manukyan [aut, cre, fnd]

ImageArray_1.1.2.tar.gz
ImageArray_1.1.2.zip(r-4.7)ImageArray_1.1.2.zip(r-4.6)ImageArray_1.1.2.zip(r-4.5)
ImageArray_1.1.2.tgz(r-4.6-any)ImageArray_1.1.2.tgz(r-4.5-any)
ImageArray_1.1.2.tar.gz(r-4.7-any)ImageArray_1.1.2.tar.gz(r-4.6-any)
ImageArray_1.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ImageArray/json (API)

# Install 'ImageArray' in R:

install.packages('ImageArray', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bimsbbioinfo/imagearray/issues

On BioConductor:ImageArray-1.1.2(bioc 3.24)ImageArray-1.0.0(bioc 3.23)

software visualization

7.09 score 6 stars 2 packages 17 scripts 131 downloads 20 exports 75 dependencies

Last updated from:1dccd3a787. Checks:6 NOTE, 2 ERROR, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	212
linux-devel-x86_64	ERROR	449
source / vignettes	OK	252
linux-release-x86_64	NOTE	477
macos-release-arm64	NOTE	284
macos-oldrel-arm64	NOTE	245
windows-devel	ERROR	382
windows-release	NOTE	346
windows-oldrel	NOTE	454
wasm-release	OK	219

Exports:aperm axes BFArray create_zarr create_zarr_group createImageArray crop flip flop getImageInfo ImageArray meta modulate negate path path<-realize rotate type writeImageArray

Dependencies:abind askpass base64enc BiocGenerics biocmake bitops bslib cachem cli curl DelayedArray digest dir.expiry EBImage evaluate fastmap fftwtools filelock fontawesome fs generics glue grumpy h5mread HDF5Array highr htmltools htmlwidgets httr2 IRanges jpeg jquerylib jsonlite knitr lattice lifecycle locfit magick magrittr Matrix MatrixGenerics matrixStats memoise mime openssl paws.common paws.storage png R.methodsS3 R.oo R.utils R6 rappdirs Rarr Rcpp RCurl rhdf5 rhdf5filters Rhdf5lib rlang rmarkdown S4Arrays S4Vectors sass SparseArray sys tiff tinytex vctrs withr xfun xml2 XVector yaml ZarrArray

ImageArray

Rendered fromImageArray.Rmdusingknitr::rmarkdown

Last update: 2026-05-30
Started: 2025-11-09

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
BFArray constructor method	BFArray BFArray-methods dim,BFArraySeed-method type,BFArraySeed-method
create_zarr	create_zarr
create_zarr_group	create_zarr_group
createImageArray	createImageArray
getImageInfo	getImageInfo
Methods for ImageArray	aperm,ImageArray-method as.raster as.raster,ImageArray-method as.raster.ImageArray axes axes,ImageArray-method crop crop,ImageArray-method dim,ImageArray-method flip flip,ImageArray-method flop flop,ImageArray-method ImageArray ImageArray-methods length,ImageArray-method meta meta,ImageArray-method modulate modulate,ImageArray-method negate negate,ImageArray-method path path,ImageArray-method path<-,ImageArray-method realize realize,ImageArray-method rotate rotate,ImageArray-method type,ImageArray-method [,ImageArray,ANY,ANY,ANY-method [[,ImageArray,numeric-method [[<-,ImageArray,numeric-method
writeImageArray	writeImageArray