Package: IMMAN 1.33.0

Minoo Ashtiani

IMMAN: Interlog protein network reconstruction by Mapping and Mining ANalysis

Reconstructing Interlog Protein Network (IPN) integrated from several Protein protein Interaction Networks (PPINs). Using this package, overlaying different PPINs to mine conserved common networks between diverse species will be applicable.

Authors:Minoo Ashtiani, Payman Nickchi, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari

IMMAN_1.33.0.tar.gz
IMMAN_1.33.0.zip(r-4.7)IMMAN_1.33.0.zip(r-4.6)IMMAN_1.33.0.zip(r-4.5)
IMMAN_1.33.0.tgz(r-4.6-any)IMMAN_1.33.0.tgz(r-4.5-any)
IMMAN_1.33.0.tar.gz(r-4.7-any)IMMAN_1.33.0.tar.gz(r-4.6-any)
IMMAN_1.33.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
IMMAN/json (API)

# Install 'IMMAN' in R:

install.packages('IMMAN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

Celegance - Celegance
FruitFly - Fruit Fly
H.sapiens - Homo sapiens
R.norvegicus - Rattus norvegicus

On BioConductor:IMMAN-1.33.0(bioc 3.24)IMMAN-1.32.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

sequencematching alignment systemsbiology graphandnetwork network proteomics

4.90 score 4 scripts 8 mentions 1 exports 60 dependencies

Last updated from:8b4a9dee3b. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	ERROR	165
linux-devel-x86_64	NOTE	454
source / vignettes	OK	321
linux-release-x86_64	NOTE	379
macos-release-arm64	NOTE	299
macos-oldrel-arm64	NOTE	387
windows-devel	NOTE	331
windows-release	NOTE	259
windows-oldrel	NOTE	317
wasm-release	OK	155

Exports:IMMAN

Dependencies:ade4 askpass BiocGenerics Biostrings bit bit64 bitops blob cachem caTools chron cli cpp11 crayon curl DBI fastmap generics glue gplots gsubfn gtools hash httr igraph IRanges jsonlite KernSmooth lattice lifecycle magrittr MASS Matrix memoise mime nlme openssl pixmap pkgconfig plotrix plyr png proto pwalign R6 RColorBrewer Rcpp RcppArmadillo rlang RSQLite S4Vectors segmented Seqinfo seqinr sp sqldf STRINGdb sys vctrs XVector

IMMAN

Citations

Rendered fromIMMAN.Rmdusingknitr::rmarkdown

Last update: 2020-06-12
Started: 2017-11-26

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Celegance	Celegance
Fruit Fly	FruitFly
Homo sapiens (Human)	H.sapiens
Interlog protein network reconstruction by Mapping and Mining ANalysis	IMMAN
Rattus norvegicus (Rat)	R.norvegicus