Introduction to HiContactsData | HiContacts and HiContactsData | Session info
Package: HiContactsData 1.15.0
Jacques Serizay
HiContactsData: HiContacts companion data package
Provides a collection of Hi-C files (pairs, (m)cool and fastq). These datasets can be read into R and further investigated and visualized with the HiContacts package. Data includes yeast Hi-C data generated by the Koszul lab from the Pasteur Institute.
Authors:
HiContactsData_1.15.0.tar.gz
HiContactsData_1.15.0.tar.gz(r-4.7-any)HiContactsData_1.15.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
HiContactsData/json (API)
| # Install 'HiContactsData' in R: |
| install.packages('HiContactsData', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/js2264/hicontactsdata/issues
On BioConductor:HiContactsData-1.15.0(data/experiment 3.24)HiContactsData-1.14.0(data/experiment 3.23)
experimenthubexperimentdatasequencingdatadatapkg
Last updated from:30ff3205ce. Checks:1 NOTE, 3 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | NOTE | 135 | ||
| linux-devel | OK | 240 | ||
| source / vignettes | OK | 206 | ||
| linux-release | OK | 278 |
Exports:HiContactsData
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| HiContactsData | HiContactsData |