Package: Guitar 2.21.0

Jia Meng

Guitar: Guitar

The package is designed for visualization of RNA-related genomic features with respect to the landmarks of RNA transcripts, i.e., transcription starting site, start codon, stop codon and transcription ending site.

Authors:Xiao Du, Hui Liu, Lin Zhang, Jia Meng

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Guitar.pdf |Guitar.html✨
Guitar/json (API)
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Peer review:

On BioConductor:Guitar-2.21.0(bioc 3.20)Guitar-2.20.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 0.91 score 94 dependencies 5 mentions

Last updated 2 months agofrom:feed882a6e

Exports:GRangesListmapToTranscriptsGuitarPlotmakeGuitarTxdbnormalizesamplePoints

Dependencies:abindAnnotationDbiaskpassBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobcachemclicodetoolscolorspacecpp11crayoncurlDBIDelayedArraydplyrevaluatefansifarverfastmapformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesggplot2gluegtablehighrhttrIRangesisobandjsonliteKEGGRESTknitrlabelinglambda.rlatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplogrpngR6RColorBrewerRCurlrestfulrRhtslibrjsonrlangRsamtoolsRSQLitertracklayerS4ArraysS4VectorsscalessnowSparseArraySummarizedExperimentsystibbletidyselectUCSC.utilsutf8vctrsviridisLitewithrxfunXMLXVectoryamlzlibbioc