Package: GWASdata 1.51.0

Stephanie Gogarten

GWASdata: Data used in the examples and vignettes of the GWASTools package

Selected Affymetrix and Illlumina SNP data for HapMap subjects. Data provided by the Center for Inherited Disease Research at Johns Hopkins University and the Broad Institute of MIT and Harvard University.

Authors:Stephanie Gogarten

GWASdata_1.51.0.tar.gz
GWASdata_1.51.0.tar.gz(r-4.7-any)GWASdata_1.51.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
GWASdata/json (API)

# Install 'GWASdata' in R:
install.packages('GWASdata', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • affy_scan_annot - Data used in the examples and vignettes of the GWASTools package.
  • affy_snp_annot - Data used in the examples and vignettes of the GWASTools package.
  • affyScanADF - Data used in the examples and vignettes of the GWASTools package.
  • affySnpADF - Data used in the examples and vignettes of the GWASTools package.
  • illumina_scan_annot - Data used in the examples and vignettes of the GWASTools package.
  • illumina_snp_annot - Data used in the examples and vignettes of the GWASTools package.
  • illuminaScanADF - Data used in the examples and vignettes of the GWASTools package.
  • illuminaSnpADF - Data used in the examples and vignettes of the GWASTools package.

On BioConductor:GWASdata-1.51.0(data/experiment 3.24)GWASdata-1.50.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

experimentdatamicroarraydatasnpdatahapmapdatapkg

3.00 score 50 scripts 0 exports 86 dependencies

Last updated from:8cb428d08f. Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR143
linux-develNOTE225
source / vignettesOK178
linux-releaseNOTE241

Exports:

Dependencies:backportsBiobaseBiocGenericsbitbit64blobbootbroomcachemclicliprcodetoolscpp11crayondata.tableDBIDNAcopydplyrfastmapforcatsforeachformula.toolsgdsfmtgenericsglmnetglueGWASExactHWGWASToolshavenhmsiteratorsjomolatticelifecyclelme4lmtestlogistfmagrittrMASSMatrixMatrixModelsmemoisemgcvmiceminqamitmlnlmenloptrnnetnumDerivoperator.toolsordinalpanpillarpkgconfigprettyunitsprogresspurrrquantregquantsmoothR6rbibutilsRcppRcppEigenRdpackreadrreformulasrlangrpartRSQLitesandwichshapeSparseMstringistringrsurvivaltibbletidyrtidyselecttzdbucminfutf8vctrsvroomwithrzoo

Readme and manuals

Help Manual

Help pageTopics
Data used in the examples and vignettes of the GWASTools package.GWASdata-package affyScanADF affySnpADF affy_scan_annot affy_snp_annot GWASdata illuminaScanADF illuminaSnpADF illumina_scan_annot illumina_snp_annot