Package: GSE280465 0.99.1

Paul Ruiz

GSE280465: EPICv2 Methylation ExperimentHub Data from GEO

Provides ExperimentHub access to a processed DNA methylation resource derived from GEO accession GSE280465. The resource contains adult Illumina Infinium MethylationEPIC version 2 data from 163 samples across four tissue types, represented as a RangedSummarizedExperiment with beta, M, and CN assays, hg38 genomic ranges, and sample phenotype metadata.

Authors:Paul Ruiz [aut, cre]

GSE280465_0.99.1.tar.gz
GSE280465_0.99.1.tar.gz(r-4.7-any)GSE280465_0.99.1.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
GSE280465/json (API)

# Install 'GSE280465' in R:

install.packages('GSE280465', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/paulyrp/gse280465/issues

On BioConductor:GSE280465-0.99.1(data/experiment 3.24)

experimentdata experimenthub geo homo_sapiens_data methylationarraydata microarraydata tissue aging-clock bioconductor dna-methylation epicv2 epigenetics epigenomewideassociation genomics gse280465 homo-sapiens illumina-epicv2 methylation-array rangedsummarizedexperiment summarizedexperiment zenodo datapkg

4.18 score 4 scripts 2 exports 57 dependencies

Last updated from:acd0a41e56. Checks:1 NOTE, 3 OK. Indexed: yes.

This is a data package. Data packages may be large and do not get checked across all platforms.

Target	Result	Time
bioc-checks	NOTE	163
linux-devel	OK	315
source / vignettes	OK	245
linux-release	OK	254

Exports:GSE280465 GSE280465_GPL33022_EPICv2

Dependencies:AnnotationDbi AnnotationHub askpass Biobase BiocBaseUtils BiocFileCache BiocGenerics BiocManager BiocVersion Biostrings bit bit64 blob cachem cli cpp11 crayon curl DBI dbplyr dplyr ExperimentHub fastmap filelock generics glue httr httr2 IRanges jsonlite KEGGREST lifecycle magrittr memoise mime openssl pillar pkgconfig png purrr R6 rappdirs rlang RSQLite S4Vectors Seqinfo stringi stringr sys tibble tidyr tidyselect utf8 vctrs withr XVector yaml

GSE280465 EPICv2 methylation data

Accessing the resource | Data availability | Session information

Rendered fromGSE280465.Rmdusingknitr::rmarkdown

Last update: 2026-07-05
Started: 2026-07-05

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
GSE280465 EPICv2 methylation data in ExperimentHub	GSE280465-package
Load the GSE280465 ExperimentHub resource	GSE280465 GSE280465_GPL33022_EPICv2