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Package: GSE159526 1.19.0
Victor Yuan
GSE159526: Placental cell DNA methylation data from GEO accession GSE159526
19 term and 9 first trimester placental chorionic villi and matched cell-sorted samples ran on Illumina HumanMethylationEPIC DNA methylation microarrays. This data was made available on GEO accession [GSE159526](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE159526). Both the raw and processed data has been made available on \code{ExperimentHub}. Raw unprocessed data formatted as an RGChannelSet object for integration and normalization using minfi and other existing Bioconductor packages. Processed normalized data is also available as a DNA methylation \code{matrix}, with a corresponding phenotype information as a \code{data.frame} object.
Authors:
GSE159526_1.19.0.tar.gz
GSE159526_1.19.0.tar.gz(r-4.7-any)GSE159526_1.19.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
GSE159526/json (API)
| # Install 'GSE159526' in R: |
| install.packages('GSE159526', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/wvictor14/gse159526/issues
On BioConductor:GSE159526-1.19.0(data/experiment 3.24)GSE159526-1.18.0(data/experiment 3.23)
experimentdataexperimenthubgeogenometissuemethylationarraydatahomo_sapiens_datadatapkg
Last updated from:a260d6d0af. Checks:1 WARNING, 3 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 150 | ||
| linux-devel | OK | 243 | ||
| source / vignettes | OK | 233 | ||
| linux-release | OK | 204 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| GEO accession GSE159526 available as raw data in a 'RGChannelSetExtended' object, and as processed normalized data. | GSE159526-package GSE159526 |