Package: FitHiC 1.39.0
FitHiC: Confidence estimation for intra-chromosomal contact maps
Fit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
Authors:
FitHiC_1.39.0.tar.gz
FitHiC_1.39.0.zip(r-4.7)FitHiC_1.39.0.zip(r-4.6)FitHiC_1.39.0.zip(r-4.5)
FitHiC_1.39.0.tgz(r-4.6-x86_64)FitHiC_1.39.0.tgz(r-4.6-arm64)FitHiC_1.39.0.tgz(r-4.5-x86_64)FitHiC_1.39.0.tgz(r-4.5-arm64)
FitHiC_1.39.0.tar.gz(r-4.7-arm64)FitHiC_1.39.0.tar.gz(r-4.7-x86_64)FitHiC_1.39.0.tar.gz(r-4.6-arm64)FitHiC_1.39.0.tar.gz(r-4.6-x86_64)
FitHiC_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
FitHiC/json (API)
| # Install 'FitHiC' in R: |
| install.packages('FitHiC', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:FitHiC-1.39.0(bioc 3.24)FitHiC-1.38.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:f0162be6b6. Checks:1 WARNING, 13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 129 | ||
| linux-devel-arm64 | OK | 221 | ||
| linux-devel-x86_64 | OK | 246 | ||
| source / vignettes | OK | 253 | ||
| linux-release-arm64 | OK | 192 | ||
| linux-release-x86_64 | OK | 252 | ||
| macos-release-arm64 | OK | 140 | ||
| macos-release-x86_64 | OK | 273 | ||
| macos-oldrel-arm64 | OK | 142 | ||
| macos-oldrel-x86_64 | OK | 376 | ||
| windows-devel | OK | 196 | ||
| windows-release | OK | 180 | ||
| windows-oldrel | OK | 187 | ||
| wasm-release | OK | 127 |
Exports:FitHiC
Dependencies:data.tablefdrtoolRcpp
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fit-Hi-C | FitHiC |
